Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1450 ATGGGGTCAATCCAAACACCCATCACAATGCGAAGCTCCGCAATACTAGAAAGTTCTTGCGGCTACTTGCTTCAAGAATTGCAGATGATCTGGGATGAAGTAGGAGAAGATCAGTATGAAAGAGAGAAGGTTCTACTAGATCTAGAACAGGAGTGTCTCGAAGTTTATCGACGAAAAGTTGATAGTGCAAATATTTCAAGAGCACGCCTGCATCAGGAGTTGGCAGAGTCTGAGGCTGAATTTACTCATCTTCTTTTGTCCCTCGGAGAACGGTCTCTTCCTGGACGGCCAGAAAAAATGGCAGGAACACTGAAGGAGCAGCTAGATTCAATCACCCCAGTTCTACGTGAGATGCAGCTGAGGAAGGAAGAAAGGATGAACCAGTTTCGAGCTGTACAAGGGCAGATTCAGAAAATTTCTGCAGAAATTGCAGGTCAATCAGAGTATGATGACTCATCGTCAACTGTCATAGTGAATGAAAACGATCTTTCACTGAAGAAACTTGAGGAGTACCAAATTGAGCTACAAAGGCTACACAAGGAGAAGAGTGACAGGCTCCAGAGAGTGGAAAAATACATAAGTACAGTTCAAAACCTGTCTACAACATTGGGGATGGATTCATCTGTGATCATCACAAAGGTTCATCCAAGCTTGAATGAATTGTGTGGAATATCTAAAAACATAAGTGACAGTATTCTGGCTAAACTCAACAGCACCGTGGAGTCTCTTGAGGAAGAAAAGAAAACACGGCTTGAGAAGCTTCACCATCTCGGTAAAGCATTGACAAACTTGTGGAATCTTATGGACACACCCTATGAAGACAGGCAGTTATTTTCTCATGTTACCAAATTATTATCTGTCTCATCAGCAGAAATATCTAATCCTGGAAGCCTCACCCTCGATACAATAAAGCAGGCTGAGGCTGAAGTGGAGAGACTGGATCACCTAAAAGCAAGCAAGATGAAAGAGCTTTTCCTTAAGAAACAAATTGAGCTTGAGGAAATATGCAATAGATCACACATGGAGATACCTTCACAGTCAGAGATGGACAACATAATGAACCTTATTAACTCTGGGGAGATTGACCACGCTGATCTCCTCATGAGCATGGATGAACAGATATCAAGAGCTAGAGAAGAAGCTTCTAGCAGGAAGACAATAATGGAGAAGGTGGAAAAGTGGATGTTAGCACGTGATGAGGAGCGCTGGTTGGAAGAATACATGAGAGATGAGAACCGATATTCAGTTAGCAGAGGTGCTCACAGGAACCTAAAACGTGCAGAACGAGCACGGATTACAGTTAACAAACTCCCTGCTCTAGTGGATCTGTTGATAGCCAAGACTAAGAGTTGGGAAGAAGAAAGAACAAAGGTTTTCTTGTATGATGAGGTGCCTCTGCTAGCAATGTTAGAAGAGTACAATTTGTCAAGGCAGGAAAGAGAAGAAGAGAAGCAAAGACAAAGGGAGAAGAAGAAAGTGCAAAGCCAAGTGGTAGTTGAACAAGAAAATTTGTTTGGGTCCAGGCCAAGCACCAGCAGTCGCCGCCTTTCAAACATGAGCTTGAATGGAGGTTTTAGCACCGCTACTGCTTTAAATAGAAGGCTCTCCCTGGGTATCCAGCAGTTGGGTTCAAACAGCATCAACTCACCAACTCAAGGCTTATCCTTCATAAAGGAAGGAAAGAAGGCTCAGGGACAAAAGATGTCTGTTCGACTGAGCCTTGTTTCTCATCCTAGAGAAGAAACAGCTTCAGTGGTCCCAACATTTTCAGGCCCCTTATCCCCATGA 1788 0.434 MGSIQTPITMRSSAILESSCGYLLQELQMIWDEVGEDQYEREKVLLDLEQECLEVYRRKVDSANISRARLHQELAESEAEFTHLLLSLGERSLPGRPEKMAGTLKEQLDSITPVLREMQLRKEERMNQFRAVQGQIQKISAEIAGQSEYDDSSSTVIVNENDLSLKKLEEYQIELQRLHKEKSDRLQRVEKYISTVQNLSTTLGMDSSVIITKVHPSLNELCGISKNISDSILAKLNSTVESLEEEKKTRLEKLHHLGKALTNLWNLMDTPYEDRQLFSHVTKLLSVSSAEISNPGSLTLDTIKQAEAEVERLDHLKASKMKELFLKKQIELEEICNRSHMEIPSQSEMDNIMNLINSGEIDHADLLMSMDEQISRAREEASSRKTIMEKVEKWMLARDEERWLEEYMRDENRYSVSRGAHRNLKRAERARITVNKLPALVDLLIAKTKSWEEERTKVFLYDEVPLLAMLEEYNLSRQEREEEKQRQREKKKVQSQVVVEQENLFGSRPSTSSRRLSNMSLNGGFSTATALNRRLSLGIQQLGSNSINSPTQGLSFIKEGKKAQGQKMSVRLSLVSHPREETASVVPTFSGPLSP* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1450 595 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 15 562 IPR007145 GO:0000226|GO:0008017
Vvi1g1450 595 Coils Coil 161 188 - -
Vvi1g1450 595 MobiDBLite consensus disorder prediction 574 595 - -
Vvi1g1450 595 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 513 - -
Vvi1g1450 595 FunFam 65-kDa microtubule-associated protein 6 374 507 - -
Vvi1g1450 595 Coils Coil 470 490 - -
Vvi1g1450 595 Gene3D - 374 507 - -
Vvi1g1450 595 Coils Coil 303 323 - -
Vvi1g1450 595 Coils Coil 233 253 - -
Vvi1g1450 595 Coils Coil 60 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1450 Vvi-Chr1 20879398 20883583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1450 12 528 EF-hand Containing Proteins AT5G62250 41.221 1.95e-107 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1450 K16732 - vvi:100264256 1095.11