Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1449 ATGAGCCTTGAAAGGACTCAGGGAAGTTGCGTCGCCATCCGTACTCTCTCTCCTTCTTCCGTCTCCAGATGCCCTCACGCCTCTGCCTCTTCTTCAGATGATGTGACTTGTGGGACGCCCACATGGATTGGTAGGGGCCTTACTTGTGTTTGCTTCAAGAGAAAGGGAACTTATGAACGTATTTGTATCAACTTGACACCCCACCAGGAAGAGAGACTTAGAAGGTTGAGGCATCGAATGAAAGTTTACTTTGACGCTTCACGGCCAGATCACCAGGAAGCTTTAAGAGCTCTATGGTCTGCTACCTACCCTGGTCAGGAGCTTCATGGTTTGATATCTGAACAATGGAAAGAAATGGGGTGGCAGGGAAGAGACCCATCAACTGATTTCAGAGGAGCTGGATTCATTTCCTTGGAGAACCTGCTGTTCTTTGCCAAGACATTTTCCATATCTTTTCAACTTCTTTTAAAGAAGCAGAGGGGAAAGCGAGCTGCATGGGAATATCCATTCGCTGTTGCTGGTGTAAATATCACATTCATGATAATGCAGATGCTTGATCTAGATGCTTCAAAACCCAGGACCTTTGTCAGAGCAGTGTTCTTACAGATGTTGTCAGAGAATGAGTGGGCCTTTGACTTGCTTTATTGTGTGGCTTTCATGGTTATGGACAAACAATGGCTGGATAGGAATGCCACATACATGGAGTTCAATGATGTTTTGAAATCTACTCGAGCTCAGCTGGAAAAGGAACTTCTAATGGATGACGTCCTACGGATAGAAGACATGCCTTCTTACGGTCTTCTCTGTTAA 810 0.4531 MSLERTQGSCVAIRTLSPSSVSRCPHASASSSDDVTCGTPTWIGRGLTCVCFKRKGTYERICINLTPHQEERLRRLRHRMKVYFDASRPDHQEALRALWSATYPGQELHGLISEQWKEMGWQGRDPSTDFRGAGFISLENLLFFAKTFSISFQLLLKKQRGKRAAWEYPFAVAGVNITFMIMQMLDLDASKPRTFVRAVFLQMLSENEWAFDLLYCVAFMVMDKQWLDRNATYMEFNDVLKSTRAQLEKELLMDDVLRIEDMPSYGLLC* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1449 269 PANTHER ENGULFMENT AND CELL MOTILITY 21 266 - -
Vvi1g1449 269 Pfam ELMO/CED-12 family 75 240 IPR006816 -
Vvi1g1449 269 ProSiteProfiles ELMO domain profile. 90 251 IPR006816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1449 Vvi-Chr1 20870539 20876136 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1449 K23538 - vvi:100259084 548.895