Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi1g1435 | ATGGATTGGCAAGGGCAAAAGCTAGCGGAGCAGTTGATGCAGACTTTGCTGCTGGCATTCGCGGTGGTGGCTTTTGTGGCTGGCTATTCGCTTGGTTCGTTTCAGATGATGCTGCTTATATACGCCGGTGGTGTTGCTCTCACTACGTTGATCACTGTGCCCAATTGGCCTTTCTTCAATCGCCACCCCCTCAAGTGGTTGGATTCCAGTGAAGTGGATCGTCATCCCAAGCCCCAGCCAGTGAAATCGAAGAAGAAGCCTACAAAGCAGAAGTAG | 276 | 0.5145 | MDWQGQKLAEQLMQTLLLAFAVVAFVAGYSLGSFQMMLLIYAGGVALTTLITVPNWPFFNRHPLKWLDSSEVDRHPKPQPVKSKKKPTKQK* | 92 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi1g1435 | 91 | MobiDBLite | consensus disorder prediction | 70 | 91 | - | - | |
| Vvi1g1435 | 91 | Pfam | Microsomal signal peptidase 12 kDa subunit (SPC12) | 1 | 70 | IPR009542 | GO:0005787|GO:0006465|GO:0016020 | |
| Vvi1g1435 | 91 | PANTHER | MICROSOMAL SIGNAL PEPTIDASE 12 KDA SUBUNIT | 1 | 90 | IPR009542 | GO:0005787|GO:0006465|GO:0016020 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi1g1435 | K12946 | - | vvi:100252350 | 150.214 |