Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1429 ATGAGTGGAAATGGAAGAAGAAGTGCTCGAAGTAGAATCAAATCCTCCGCGGATGTCGATGAATTCGATCGTCGCCGGAACTCAAAACCTGACCGGGAAGTCCGAAAGGACAGAATCGGAGATCACAGCTTCATTAGAATTTTAAATGTTAATATCAAGGCTCTGCTTGGGTTTGTGGTTTTGGCTTTCTTCATTGTCTTGTTCCTAATTCTTCACTTAATGAAACCGGTTGAAGATGCTCAAAGACCTAGGGTTGTTACGCCATTTCCTGCCCCAAAGATCATGGATCTTCCTCAGTTCCAAGGCGAGCACAAGGAGAGCTTGTATTGGGGAACATATCGCCCTCAGGTTTATCTTGGAATTCGTGCCAGGACACCCCAATCTTTGGTTGCTGGTTTGATGTGGATTGGAGTAAAGGATGGAAGATATTTCATGCGACATGTCTGCCAAGATTCTGATGAGCTCAGCACGTATGGTTGGACACATCACAATGGAAGGGATTATGGACATCAGGTGCTGATTGACCATGGCATGACCTTGGCTACAAGTTTCTTGAAATCCAAGGAGGACGGCAGTGGCTATGGAGGAGACTGGACGGTTCGAATTGATGTGAAAAGTGAGAAGTGGAATGAGGAAATGTTGAGAAGTGCACACCTTTTTTTCTATTTGGCTGATGAAGATGGAAATGCTCTAAGTTTGAGTGGAGACATCTTGGACATTCGTGAGAATTCTCTTCTGGCATTGGGTTCAAGAATGGATGTCGGAGGTTGGCAGCTGCATTTAGAATCAGTGGATGATTTGGAAGTCCATTATTCTGGTTTCAGGACACCTCACATTCACAATTTATCTGATCTTGTCCAGGAAAGTCTTGGAGAGCAAGTAAGAAAGTTTGGTCGTCTGCAGCTCCCAGACACATCTGATAATTCTCCAAACATTTTAGTTTTTCAGATTTCTGCTAAGGTTCCTTTCAAAATAGACATTCCTTTTCTATCTGGAACTGGTTTGAAAAGCTCAAGGGTAGAAGAACGTCTCAATAGCCTTACAGGTACCTCCCTGACCAGAGAATTAATTGAGAAGCAAAATGAATTTGACAACAAATTTGAGAAATGCTTCAATCTTACCAGCAAGGTTGACTCTGAATCTTTGATTGTTGGTAAGGCTGCTATTGGAAATATGTTAGGTGGCATTGGCTATTTCTATGGCCAATCAAAAATTTCACTCCCAAAAAACAATAATTTTAAGAGTCATGATAATTTTATTTCATATTGGCCGGCTGAACTTTACACAGCTGTTCCAAGTCGATCCTTCTTTCCAAGGGGATTTTTATGGGATGAAGGTTTTCATCAGCTACTAATTTGGCGTTGGGACATCCGCATTTGTTTGGATATAATTGGACATTGGTTAGATTTAATGAACATTGATGGATGGATACCAAGGGAGCAAATTTTGGGTGCCGAAGCTCTAAGTAAGGTCCCAGAGGAATTTGTTCTTCAGCATCCAACTAATGGAAATCCCCCAACTTTATTTTTGGTTTTACATGATCTAGTTTCTAGCTTAAAAAGAAACAAGTTTACTTCCATGGAAAGCAATGAGATATCTTCCTTCCTAGAACGGGCATTTGTTCGTCTGGAAGCTTGGTTCCAATGGTTCAATACTACACAATCAGGAAATGAGATGAGTAGCTATTTTTGGCACGGAAGAGACAGCACCACAACTCGGGAACTAAATCCAAAGACACTGTCCTCTGGCTTGGACGATTACCCACGAGCATCACACCCTAGTGGAGAAGAGCACCATGTGGATCTTAGATGCTGGATGCTTCTTGCAGCTGAATGCATGCATTCCATCACAGAGTTATTCCGGAAGGAAAATGGACTGGAAAAGGAGTATGGTTCAACTGCTAAGCTGCTCTCAGATTTTGACATTCTGAATCAGATGCACCTTGATAAGGCACATGGAGCTTATTTTGATTTTGGAAATCATACAGAGAAGGTTCGATTAAGTTGGAAAGAAGTGAGGGCAGGGAACAACTATCCTACTCGAGAACTCGTTAGAGAAACATTAGAGAAGCCAGAGTTGAGGCTGGTTCCACATATTGGTTATGTCAGCCTTTTTCCATTTATGGAGAAGATCATTCCACCCGAGTCATGGATCCTAGAAAAACAGCTTGACCTAATTTCAAACAGGAGCACCTTATGGACCGACTATGGACTCCGCTCCCTTTCTAAAACAAGCTCATTATACATGAAACGTAACACAGAGCATGACCCACCTTACTGGAGAGGTCCAATTTGGATGAACATGAATTACAGGATTCTTTCTGCACTCCACCATTATTCCCAAGTTGATGGACCATACAGAGACAAGGCCAGAATCATCTACAATGACTTGAGGGGAAATTTGATTAGAAATGTGGTTCACAACTACTACCAGTCTGGTTATTTGTGGGAACAGTATGATCAAAAGAAGGGGAAGGGAAAAGGTGCACGGCCGTTTACTGGCTGGACATCCCTTGTGTTACTGATTATGGCAGAAACATATTGTGAGAGGTAG 2553 0.4215 MSGNGRRSARSRIKSSADVDEFDRRRNSKPDREVRKDRIGDHSFIRILNVNIKALLGFVVLAFFIVLFLILHLMKPVEDAQRPRVVTPFPAPKIMDLPQFQGEHKESLYWGTYRPQVYLGIRARTPQSLVAGLMWIGVKDGRYFMRHVCQDSDELSTYGWTHHNGRDYGHQVLIDHGMTLATSFLKSKEDGSGYGGDWTVRIDVKSEKWNEEMLRSAHLFFYLADEDGNALSLSGDILDIRENSLLALGSRMDVGGWQLHLESVDDLEVHYSGFRTPHIHNLSDLVQESLGEQVRKFGRLQLPDTSDNSPNILVFQISAKVPFKIDIPFLSGTGLKSSRVEERLNSLTGTSLTRELIEKQNEFDNKFEKCFNLTSKVDSESLIVGKAAIGNMLGGIGYFYGQSKISLPKNNNFKSHDNFISYWPAELYTAVPSRSFFPRGFLWDEGFHQLLIWRWDIRICLDIIGHWLDLMNIDGWIPREQILGAEALSKVPEEFVLQHPTNGNPPTLFLVLHDLVSSLKRNKFTSMESNEISSFLERAFVRLEAWFQWFNTTQSGNEMSSYFWHGRDSTTTRELNPKTLSSGLDDYPRASHPSGEEHHVDLRCWMLLAAECMHSITELFRKENGLEKEYGSTAKLLSDFDILNQMHLDKAHGAYFDFGNHTEKVRLSWKEVRAGNNYPTRELVRETLEKPELRLVPHIGYVSLFPFMEKIIPPESWILEKQLDLISNRSTLWTDYGLRSLSKTSSLYMKRNTEHDPPYWRGPIWMNMNYRILSALHHYSQVDGPYRDKARIIYNDLRGNLIRNVVHNYYQSGYLWEQYDQKKGKGKGARPFTGWTSLVLLIMAETYCER* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1429 850 Pfam Glycosyl hydrolase family 63 C-terminal domain 348 845 IPR031335 -
Vvi1g1429 850 Gene3D - 375 850 IPR012341 GO:0005975
Vvi1g1429 850 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 60 847 IPR004888 GO:0004573|GO:0009311
Vvi1g1429 850 FunFam mannosyl-oligosaccharide glucosidase 375 847 - -
Vvi1g1429 850 SUPERFAMILY Six-hairpin glycosidases 361 848 IPR008928 GO:0005975
Vvi1g1429 850 Pfam Glycosyl hydrolase family 63 N-terminal domain 107 266 IPR031631 -
Vvi1g1429 850 FunFam Mannosyl-oligosaccharide glucosidase GCS1 95 374 - -
Vvi1g1429 850 MobiDBLite consensus disorder prediction 11 35 - -
Vvi1g1429 850 Gene3D - 95 374 IPR038518 -
Vvi1g1429 850 MobiDBLite consensus disorder prediction 1 35 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1429 74 847 Glycoside Hydrolase AT1G24320 62.291 0.0 1004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1429 K01228 - vvi:100264375 1730.3