Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1415 ATGCTAATGATATTGATCGATTATGCTATTGCCATGATTATTCTGCTCACCTTGACATATCTATCCAAGAACAAAATGTCTGGTGGGATTCCGAGTTGGATGTGTTCAAAATCTTCACTTACTCAGTTGATATTGGGTGACAACAATCTTTCTGGGGAACCCTTTCCAAGCTTACGAAACTGCACAGGGTTGTACTCCCTTGATCTTGGAAATAACAGGTTTTCGGGGGAGATACCCAAATGGATTGGAGAAAGAATGCCATCACTGGAGCAGCTGCGTCTACGGGGTAACATGTTGACAGGAGATATTCCTGAGAAATTGTGTTGGCTTTCTCATCTCCACATTTTGGATCTTGCAGTGAACAATTTATCAGGATCCATCCCACAATGCTTAGGCAATTTAACTGCTTTAAGTTTTGTGACCTTATTAGACAGAAATTTTGACGACCCCAATGGTCATGTCGTCTATTCGGAGCGCATGGAGCTAGTTGTAAAGGGACAAAATATGGAATTTGATAGCATATTGCCAATTGTGAATTTGATAGATCTTTCTAGCAATAACATTTGGGGAGAGATCCCAAAAGAGATCACAAATCTCTCGACCCTGGGTACCTTGAATTTGTCCCGAAACCAGTTGACTGGAAAGATACCTGAGAAGATTGGAGCCATGCAAGGGCTAGAAACTCTTGACCTCTCATGCAACTGCCTTTCAGGCCCAATTCCTCCGAGCATGTCTTCTATAACCTCATTGAACCATTTGAACCTATCGCATAACCGCCTGTCAGGACCAATTCCAAAAACCAACCAGTTCTCGACATTCAACGATCCATCCATTTATGAGGCGAACTTGGGACTTTGTGGGCCTCCATTGTCAACCAACTGCTCCACTTTAAATGATCAAGATCACAAAGATGAGGAGGAAGATGAAGATGAATGGGACATGTCATGGTTCTTCATAAGCATGGGATTGGGCTTTCCGGTGGGATTTTGGGTTGTATATGGCAGTTTGGTTCTAAAGAAGTCTTGGAGGCAGGCATATTTCCGGTTCATTGATGAAACCAGAGATAGGCTATATGTCTTCACTGCAGTGAATGTGGCTCGTCTGAAAAGGAAGATGGAAGCAAATGGAGTTCATGGCTAA 1140 0.4281 MLMILIDYAIAMIILLTLTYLSKNKMSGGIPSWMCSKSSLTQLILGDNNLSGEPFPSLRNCTGLYSLDLGNNRFSGEIPKWIGERMPSLEQLRLRGNMLTGDIPEKLCWLSHLHILDLAVNNLSGSIPQCLGNLTALSFVTLLDRNFDDPNGHVVYSERMELVVKGQNMEFDSILPIVNLIDLSSNNIWGEIPKEITNLSTLGTLNLSRNQLTGKIPEKIGAMQGLETLDLSCNCLSGPIPPSMSSITSLNHLNLSHNRLSGPIPKTNQFSTFNDPSIYEANLGLCGPPLSTNCSTLNDQDHKDEEEDEDEWDMSWFFISMGLGFPVGFWVVYGSLVLKKSWRQAYFRFIDETRDRLYVFTAVNVARLKRKMEANGVHG* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1415 379 SUPERFAMILY L domain-like 17 290 - -
Vvi1g1415 379 PANTHER LRR RECEPTOR-LIKE KINASE 20 353 - -
Vvi1g1415 379 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 54 150 - -
Vvi1g1415 379 Gene3D Ribonuclease Inhibitor 6 303 IPR032675 -
Vvi1g1415 379 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 170 294 - -
Vvi1g1415 379 Pfam Leucine rich repeat 201 260 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1415 Vvi-Chr1 20413726 20446956 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1415 21 294 Receptor kinase-like Gene Family AT4G04220 37.931 3.06e-49 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1415 - - vvi:100855198 711.449