Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1414 ATGCCTGTCCACCAGGATGGCTCTTGCAATGGCTTACAACACCATGCTGCCCTTGGAAGGGACAAGGTAGTGGAATTTTCTGTTTTTGGTTGA 93 0.4839 MPVHQDGSCNGLQHHAALGRDKVVEFSVFG* 31
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1414 30 Pfam DNA-dependent RNA polymerase 1 23 IPR046950 -
Vvi1g1414 30 PANTHER DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL 1 24 IPR002092 GO:0003677|GO:0003899|GO:0006351
Vvi1g1414 30 SUPERFAMILY DNA/RNA polymerases 1 24 IPR043502 -
Vvi1g1414 30 ProSitePatterns Bacteriophage-type RNA polymerase family active site signature 1. 2 13 IPR002092 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1414 Vvi-Chr1 20407379 20407948 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1414 K10908 - sind:105179999 53.1434