Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1405 ATGGCATGGATTTACGTTGTCAGCCGGCTACGGCTGGATTATGAGAATGGGGCTTATTTGATTAAAGGCTGGATAGGAGAACTAGTCAGAATCAGTCCATCATGGTTTAAATTAATTATACATAATGGGTTTTTCCATTTTAATGGTTTTTGCGTGCAATCAGCCAATGACACACTGAAAATTATAGCATGCAAGAAACAACACAAGAAGTTAGCAGCCCTTGAGATGGAGCTAGCGGCAGCACAGCAGGAAGATTTTGCCTCAAAGAACTTGTTAGAAAATAAGGGGACTCCTCCCAAGAAAAGGCTTTTAGCTGTTGTTGGAATTATTACAAAGTTTAGCCACAAGAACAATAGAGATGCAATCTGTAAGGGCATGGATGCCAACTGGTAG 393 0.4071 MAWIYVVSRLRLDYENGAYLIKGWIGELVRISPSWFKLIIHNGFFHFNGFCVQSANDTLKIIACKKQHKKLAALEMELAAAQQEDFASKNLLENKGTPPKKRLLAVVGIITKFSHKNNRDAICKGMDANW* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1405 130 Coils Coil 64 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1405 Vvi-Chr1 20229938 20230963 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1405 1 122 Glycosyltransferase AT5G53340 40.984 1.13e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1405 K20854 - vvi:100259196 138.658