Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1400 ATGGCATCGATTTACGTCTCTGGCCGGGAACAACACAAGAAGTTAGCAGCCCTTGAGATGGAGCTAGTGGCAGCACAGCAAGAAGATTTTGCCTCAAAGAACTTGTTAGAAAATAAGGGGACTCCTCCCAAGAAAAGGCTTTTAGCTGTTGTTGGAATTATTACAAAGTTTGGCCACAAGAACAATAGAGATGCAAGCTGTAGGGGCATGGATGCCAACTGGTAG 225 0.4533 MASIYVSGREQHKKLAALEMELVAAQQEDFASKNLLENKGTPPKKRLLAVVGIITKFGHKNNRDASCRGMDANW* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1400 74 Coils Coil 8 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1400 Vvi-Chr1 20152969 20153994 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1400 6 65 Glycosyltransferase AT5G53340 55.000 6.92e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1400 K20854 - vvi:100259196 126.331