Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1366 ATGGTTCTTGGGCTGAGGACGAAGAATCGTAAAGGTGTTTTGGTTAAGGTTGATTATATAGTTCATGTTCAGGAGATTAAACCTTGGCCACCCTCACAGTCCCTCAGATCAGTTCAATCTGTGGTTTTTCAATGGGAAAATGGTGATCAGGCTTCTGGGTTTCTTAGTTGTAGTGTTGGAAATGGGAGAATTGAATTCAGCGAGTCTTTTAGGCTTCCTGTTGCTTTGTACAAGGATGGAAAAAGCCGGGGGCGTGACAGTTTCCAGAAGAACTGCTTAGAGTTCAATCTGTATGAACCTCGAAAGGACAAAGCAGGGAAAGGTCAAGTCTTGGGATCGGCTATAATAAACCTTGCGGACTATGGGATTATAGAAGAAGCCATTACCATTAGCACTCCATTGAGCTGCAAGAAGAGTCATAGGAATATGGTGCAGCCAGTTATTTTTCTTAAAATTCAGCCATTTGCAAAGGATAGCACCAGTTCATCGTCAGTGGTCAGCTTATCAAAAGAGGCATCATTGGATCAGGACGGAGGTGAATCCGTTTCAGAATTGATGAGCGAAGAAAATAATGAGGAAGTCGAGATCGCCTCTTTTACTGATGATGATGATGGTGGTGCTTCCTCACATTCATCACGCATCATTTCCTCTTCTGCATTTGAGACCACTGGATGTTCACCGGCCCAAACTGAAGAGAATGGATCAGGATCAGCAAAGGATAGCTTAAGAAGGAACAATGAAGAGCCTGCCCCATCTTTGGGACCTGCACCTGTAAAACCAGAGGCAAATTTTGTTCCTGAAGCATCCAAACACCTGAATGGGAGTTCATCCCTTTTATCAACAGGCTTGTTGACTAAACTTGAGAGCCCTGTAAATGATGAGGTTTCTTTTTCTGATTTTTCCAAGAAAAGCTCAATGTCAAGCCTAGAAGAGACTGTTACTAATCATGTTCAGTCTTCTTCCTCCTCCTTTGGTTCTCAAGGAAAAAATGAAGAGTCTGGTAAGGGCACAAGTTTTGAGCAGAAAGTTATTGTCCGTGGGAAGTTTGCTGACAGAAGTGCCAAAATTCTAAGTAGTACTGAAGAATCCAGTAGGAGCAATTTCATTGACAACCTTGCAACCAAAGTCACACCCTCAGGAACAAAAATTCAGGTGGGTGTCAACTCTAACCTTGTAGCAACTGTAGAATCTCAAGCCAATGGAAAGGATGATGAGAAATCACGAAGGTTAAACAAAAATGACCAAGAGGAGCCTACAACTGTTGCTGATTTGCATGTTGATCTTGACAAAGAGGAAAAGGAGCAGCAAGAAAATGGACAGGGAGAACAGAACTTGGAGAAGAAGAAACATTCTTCAGAGAATGAATTAGTTAGTAAATTTACCCAAGATGTTACCAGGAAGCAAGTTGCATTAAGGAGTAATACTCTTGCATTCAACAAGCGAGTGCCTGAGATGCAGGGAAGTTTGGCAACCAATCATAAACTAAAGCATGTGAAGTCTGTACAGTTATCTTATGAGAGAGCTAAACCTGTTGGGTTATTGGAGCATAGTCCACTTATGGAAAAGGAAAAGGAAATTGATATTCAGGAAGATTCTCATAAAGATGCTAAAGGTTTTGCAGCAAGTGAAAGAAAGGAAAGAATAAATAACTTTTCTGACAGCAAAGTTGAAGTGGAGTCTAGAATTAAGATGCTTGAGGAAGAGTTGAGGGAGGCTGCTGCCATTGAGGTTGGCCTTTACTCGGTTGTTGCTGAGCATGGAAGTTCTACAAATAAGGTCCATGCTCCAGCTCGGCGTCTTTCTAGATTTTATCTTCATGCTTGCAAAGCGAGGACCCAAGCTAAGAGGGCAAGTGCTGCCAGAGCTGCTGCTTCAGGATTAGTTCTGGTTTCTAAAGCATGTGGAAATGATGTTCCAAGGTTAACTTTCTGGTTGTCGAATTCAATTGTATTGAGAGCAACTGTCAGCCAGGCCGTTGTGGAAATGCCACTTTCTGCTGGACCTTCCACCAGAAGTGGTGGAGGTAGAAACAGGTACAATAAAGAAGAAAATAATGCAAGAGAGAGTTCTGATGACTGGGAGGACCCACAAACATTTATTCTTGTGTTGGAAAAGATTGAAGGTTGGATCTTCTCCCGAATCATTGAGTCTGTGTGGTGGCAGACCCTTACTCCATACATGCAGTCCACAGCTGCAAAGATTAGTGATGGAAGTAGGGGTTCAAACTCAAGGAAAACATATGGAAGGAGACATTCTTTGGGTGATCAAGAGCAGGGGAATTTTTCTATTGAACTATGGAAGAGGGCATTCAAAGATGCCTGTGAAAGGCTTTGTCCTACACGAGCTGGAGGGCATGAGTGTGGCTGCTTGCCTGTGCTATCTAGATTGGTCATGGAACAGTTGGTCAGTAGATTAGACGTGGGAATGTTCAATGCTATTCTTCGTGAATCAGCTGAAGAGATGCCAACAGATCCTGTGTCTGATCCCATCTGTGATTCTAAAGTTCTCCCTATTCCAGCTGGAAAATCAAGCTTTGGTGCTGGTGCTCAATTGAAAAATGCTGTAGGGAACTGGTCGAGATGGCTTACAGATCTATTTGGTATTGATGACAATGACGCACCTGGAGATACAAATGAATTTAGTGATGACAAGAGGCTGAAATGTGAGACCTCCTTCAAGGTCTTCCATCTCCTTAATGCATTGAGTGATCTCATGATGCTTCCATTTGAAATGCTAGCTGATAGGTCCACAAGAAAAGAGGTATGCCCAACTTTTGGCGTACCGATCATCAGGAGGGTCCTTGACAATTTTGTCCCAGATGAGTTCTGTCCCGACCCAATTCCAGAGGTCATCTTTGAAACCCTGGATTCTGAGGACTCTCTTGAGGGTGCAGAAGAGTCTATCACAAGCTTCCCATGCATTGCGACTCCCCCAGTCTATTCTCCCCCTTCAGCTGCTTCATTTGCAAGCATCATAGGGGAGGTGGGAAGCCAAAGTCTGCAGAGGAGTGGGTCATCACTGCTTAGAAAGTCATACATTAGCGATGATGAGCTTGATGAACTGGATTCCCCCATAACTTCAATAATCGGTGACAACAGCCGAGGTACTCCTACTTCAACAAAACCCAGTTGGCTGCCTAAGGGAAAGGGGGGTAGGGATGTTGTGAGATATCGACTCCTCCGGGAAGTATGGAGGGATGGTGAATAG 3207 0.4362 MVLGLRTKNRKGVLVKVDYIVHVQEIKPWPPSQSLRSVQSVVFQWENGDQASGFLSCSVGNGRIEFSESFRLPVALYKDGKSRGRDSFQKNCLEFNLYEPRKDKAGKGQVLGSAIINLADYGIIEEAITISTPLSCKKSHRNMVQPVIFLKIQPFAKDSTSSSSVVSLSKEASLDQDGGESVSELMSEENNEEVEIASFTDDDDGGASSHSSRIISSSAFETTGCSPAQTEENGSGSAKDSLRRNNEEPAPSLGPAPVKPEANFVPEASKHLNGSSSLLSTGLLTKLESPVNDEVSFSDFSKKSSMSSLEETVTNHVQSSSSSFGSQGKNEESGKGTSFEQKVIVRGKFADRSAKILSSTEESSRSNFIDNLATKVTPSGTKIQVGVNSNLVATVESQANGKDDEKSRRLNKNDQEEPTTVADLHVDLDKEEKEQQENGQGEQNLEKKKHSSENELVSKFTQDVTRKQVALRSNTLAFNKRVPEMQGSLATNHKLKHVKSVQLSYERAKPVGLLEHSPLMEKEKEIDIQEDSHKDAKGFAASERKERINNFSDSKVEVESRIKMLEEELREAAAIEVGLYSVVAEHGSSTNKVHAPARRLSRFYLHACKARTQAKRASAARAAASGLVLVSKACGNDVPRLTFWLSNSIVLRATVSQAVVEMPLSAGPSTRSGGGRNRYNKEENNARESSDDWEDPQTFILVLEKIEGWIFSRIIESVWWQTLTPYMQSTAAKISDGSRGSNSRKTYGRRHSLGDQEQGNFSIELWKRAFKDACERLCPTRAGGHECGCLPVLSRLVMEQLVSRLDVGMFNAILRESAEEMPTDPVSDPICDSKVLPIPAGKSSFGAGAQLKNAVGNWSRWLTDLFGIDDNDAPGDTNEFSDDKRLKCETSFKVFHLLNALSDLMMLPFEMLADRSTRKEVCPTFGVPIIRRVLDNFVPDEFCPDPIPEVIFETLDSEDSLEGAEESITSFPCIATPPVYSPPSAASFASIIGEVGSQSLQRSGSSLLRKSYISDDELDELDSPITSIIGDNSRGTPTSTKPSWLPKGKGGRDVVRYRLLREVWRDGE* 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 186 200 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 295 334 - -
Vvi1g1366 1068 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 15 155 IPR019448 -
Vvi1g1366 1068 Coils Coil 548 575 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 295 342 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 676 691 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 1026 1043 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 396 419 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 733 753 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 664 691 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 209 236 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 167 276 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 399 419 - -
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 1024 1048 - -
Vvi1g1366 1068 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 304 1065 IPR021827 GO:0005643
Vvi1g1366 1068 MobiDBLite consensus disorder prediction 431 455 - -
Vvi1g1366 1068 ProSiteProfiles C2 NT-type domain profile. 7 156 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1366 Vvi-Chr1 19850487 19856544 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1366 - - vvi:100254476 1976.83