Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1362 ATGGGTTCCTCGTCTGGAGTAGTATTGGAGGAAATACCTTCCGTTGATTTGATGACGGAGCTTCTCCGCCGCATGAAGTGCTCCTCCAAGCCTGACAAGCGTCTCATTCTCGTCGGTCCACCTGGATCTGGGAAGGGCACACAGTCACCCATTATTAAGGATGAGTACTGCTTGTGCCACTTGGCCACTGGTGATATGCTGAGAGTAGCTGTTGCTGCTAAAACTCCTCTAGGAATTAAAGCTAAAGAAGCTATGGATAAGGGAGAACTTGTAACTGATGACTTGGTTGTTGGAATAATTGATGAAGCAATGAAGAAGCCCTCATGTCAGAAAGGTTTCATTCTTGATGGGTTTCCAAGGACTGTTGTCCAAGCAGAAAAGCTAGATGAAATGCTTGCAAAGCAGGGAAATAAAATTGATAAGGTGCTTAACTTTGCAATTGACGATGCCATATTGGAGGAGAGGATCACTGGACGTTGGATCCACCCCTCAAGTGGTCGGACATACCACACAAAGTTTGCACCTCCCAAAGTTTCAGGTGTTGATGATGTTACTGGAGAGCCACTGATTCAACGAAAAGATGATACTCCTGAAGTTCTGAAGTCAAGGCTGGAGGCTTTTCACAGGCAAACTGAACCAGTTATTGATTATTATGCCAAAAAGAATGTCCTTGCCCAGCTTCATGCCGAGAAACCCCCAAAAGAGGTCTCTGCTGAGGTTCAGAAAGCTCTCTCTTAG 738 0.4553 MGSSSGVVLEEIPSVDLMTELLRRMKCSSKPDKRLILVGPPGSGKGTQSPIIKDEYCLCHLATGDMLRVAVAAKTPLGIKAKEAMDKGELVTDDLVVGIIDEAMKKPSCQKGFILDGFPRTVVQAEKLDEMLAKQGNKIDKVLNFAIDDAILEERITGRWIHPSSGRTYHTKFAPPKVSGVDDVTGEPLIQRKDDTPEVLKSRLEAFHRQTEPVIDYYAKKNVLAQLHAEKPPKEVSAEVQKALS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1362 245 ProSitePatterns Adenylate kinase signature. 113 124 IPR033690 -
Vvi1g1362 245 FunFam Adenylate kinase mitochondrial 33 245 - -
Vvi1g1362 245 Pfam Adenylate kinase, active site lid 159 194 IPR007862 GO:0004017
Vvi1g1362 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 244 IPR027417 -
Vvi1g1362 245 Pfam Adenylate kinase 37 222 - -
Vvi1g1362 245 NCBIfam adenylate kinase 34 244 IPR006259 GO:0004017|GO:0005524|GO:0016776
Vvi1g1362 245 CDD ADK 34 236 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi1g1362 245 PANTHER NUCLEOTIDE KINASE 10 241 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi1g1362 245 Gene3D - 6 245 IPR027417 -
Vvi1g1362 245 PRINTS Adenylate kinase signature 64 78 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi1g1362 245 PRINTS Adenylate kinase signature 192 207 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi1g1362 245 PRINTS Adenylate kinase signature 36 49 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi1g1362 245 PRINTS Adenylate kinase signature 209 223 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi1g1362 245 PRINTS Adenylate kinase signature 113 129 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi1g1362 245 Hamap Adenylate kinase [adk]. 33 245 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1362 Vvi-Chr1 19802437 19814079 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1362 K00939 - vvi:100240759 487.648