Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1357 ATGTACAAGGCTTGTGAAATCTTCCTGCACACAAAAATCCCTCCACCAGTTCAAAAGCTTAAGGTTTTCCAAGCTCCAGAAGGTAAAAACCTTTCAATTGCCATTGGTGAAGGTGAAAAGGCTATTGACATATTTGAAGGAATTCAGGTCAAATGGGAAATGGTTTATACCAAGAAGCAGTCCAATGAAGCCATAGATTATGAATCAAGATCAATAGAGCTCAGTTTTCCTAAGAAAAACATGAAAAAGATACTGAGCTCTTACTTGCCATATGTGGTAGATAGATCAGAAGCCTTCATAGAAGAAAACAAGGTGCTGAAGCTCTATTCATACTGTGGGTCATGGGAATCAACCATCCATTAA 363 0.3829 MYKACEIFLHTKIPPPVQKLKVFQAPEGKNLSIAIGEGEKAIDIFEGIQVKWEMVYTKKQSNEAIDYESRSIELSFPKKNMKKILSSYLPYVVDRSEAFIEENKVLKLYSYCGSWESTIH* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1357 120 PANTHER BCS1 AAA-TYPE ATPASE 2 117 - -
Vvi1g1357 120 Pfam Domain associated at C-terminal with AAA 1 55 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1357 Vvi-Chr1 19756966 19757328 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1357 - K08900 vvi:100854173 193.356