Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1354 ATGGCCATCCATGCAATACTAGATACTGAAAATCCACGGAGTTTCGCTTCTGCAAACTCTACTTCTCAAAATTTTGTACTAGAATTCAGCATTGCGTACTTCCTGGTGGACCTTTTGCACTACCTGCTGTTCTTTCCCAATGATGTCCTCTTCATCAGCCACCATTTAGGAACCCTCTATGTCTTCATAACATGCCGATACATGGTCAATCATGGAGCTTTGGCGATTCTGGGGCTTCTAGTTCTTGCAGAAGCTACGAGTCCTTGTCAAAATATACGGACCCTAGCCAATGCCCGGAAAGAGGATGTGCCCGCTGCTTCCAAATTCTATGAATTCTTGACAGCTCCTGGATCACTTTAA 360 0.4472 MAIHAILDTENPRSFASANSTSQNFVLEFSIAYFLVDLLHYLLFFPNDVLFISHHLGTLYVFITCRYMVNHGALAILGLLVLAEATSPCQNIRTLANARKEDVPAASKFYEFLTAPGSL* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1354 119 ProSiteProfiles TLC domain profile. 1 119 IPR006634 GO:0016020
Vvi1g1354 119 PANTHER GLABROUS1 ENHANCER-BINDING PROTEIN-LIKE 2 1 116 IPR040327 -
Vvi1g1354 119 Pfam TLC domain 10 101 IPR006634 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1354 Vvi-Chr1 19729451 19730764 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1354 - - vvi:100252841 220.32