Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1350 ATGTCTAGTAATATTTATGTTCTTCCACCAAATTATGCACTTATACTCTGTTCTTGTTATGTAGGGATTATTAGTTTTTCAGAACTTTCGATCTGCAATTACTCAACTATTGCCTGGACAGCTTTGGTTCATAAAGGTGTCCAACCAGATGTGCAGTATACATACACAGCTTTGACCACAACTGGAAGAGTCTTCACCTTCTTTAGCACCTTGGGTGATGTAGCATTTGCCAATGCTGGTCACAATGTGGTCATTGCTGATAATATCCTCATCACACTGGAGAAACCATGTTGGCTTATAGCAGCAGCCAACATGTTTGTTATCATCCATGTTATTGGACGCTACCACTTTGCGGCAACGCCAGTGTTTGACATGTTGGAAACATTGTTGGTGAAGAAACTGAATTTCAGGCCATGTTTCAGGCTTCCTCTTATTACTCACACTCTATATGTTGTTGTCGTCTCTGCATCAGGGTCTGAAATATCCCTGGCCAGTTTCTTCAATTTGTTGGGAAAAATGGGGCTTGATAGTCAGCAGGAGAAGGATGCTAGAGACAGGGCCATTGATGATTGGCTTCCGATCACGTCCTCCCGGAACGCGAAATGGTGGTACTCTGCATTCCACAATGTGACCGCCATGGTTGGGGCTGGCGTCCTCAGTCTCCCTTACGCCGTGGCAGGGCTCGGATGGGGTCCTGGGGTGGTTATTCTTGTTCTGTCATGGATTGTCACATTGTACACTCTATGGCAAATGGTTGAGATGCATGAAATGGTTCCTGGAAAGCGGTTTGACAGATACCATGAGTTAGGACAGCATGCCTTCGGTGAAAAGCTTGGCCTCTGGATTGTGGTGCCTCAACAGGTGATTGTAGAAGTGGGTGTTAACATTGCCTACATGATCACCGGAGGCAAATCCTTGCGGAAGCTCCATAACACAGTCTGTCCCGACTGCAAACCCATCAGAACCACCTACTTCATCATGATCTTTGCCTCTTGTCACTTTGTTCTCTCCCATTTGCCCAATTTCAACTCCATCAGTGGTGTCTCATTTGCTGCCGCAGCCATGTCCTTAACTTACTCAACTATTGCTTGGACAGCTTCGGTTCATAAGGGTGTCCAACCAGATGTGCAGTATTCGTACACAGCTTCCACCACAGCTGGAAGAGTCTTCACCTTCTTTAGCGCCTTGGGTGACGTAGCATTTGCCTATGCTGGTCACAACGTGGTGTTGGAGATCCAAGCAACAATTCCTTCCACCCCTGAGAAGCCTTCCAAGGGACCCATGTGGAAAGGAGTCGTTTTCGCTTATATTGTTGTTGCCATCTGCTACTTCCCTGTTGCCCTGATTGGATACTGGATGTTTGGGAACAGCGTTGCTGATAATATCCTCATCACACTGGAGAACCCACGTTGGCTAATAGCAGCAGCCAACATGTTTGTTGTCATCCACGTTATTGGAAGCTACCAGATATATGCAATGCCAATGTTTGACTTGTTGGAAACATTGTTGGTGAAGAAACTGAAATTCACACCATGTTTTAGGCTTCGCCTTATTACCCGCACCCTATATGTTGCTTTTACTATGTTCATTGGTATGCTGATCCCTTTCTTCGGTAGTCTCCTTGGATTCTTGGGAGGATTGGTTTTTGCCCCAACAACATACTTTCTCCCTTGTATCATGTGGCTTGCTGTTTACAAACCCAGAAGGCTTAGTTTATCATGGTTTGCAAATTGGATGTGTATAGTTATGGGAATAATATTGATGATTCTAGCTCCCATTGGTGCACTGAGGCAGATCATCCTTCAAGCCAAGACCTTCAAGTTGTTCTCGTGA 1833 0.4539 MSSNIYVLPPNYALILCSCYVGIISFSELSICNYSTIAWTALVHKGVQPDVQYTYTALTTTGRVFTFFSTLGDVAFANAGHNVVIADNILITLEKPCWLIAAANMFVIIHVIGRYHFAATPVFDMLETLLVKKLNFRPCFRLPLITHTLYVVVVSASGSEISLASFFNLLGKMGLDSQQEKDARDRAIDDWLPITSSRNAKWWYSAFHNVTAMVGAGVLSLPYAVAGLGWGPGVVILVLSWIVTLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQVIVEVGVNIAYMITGGKSLRKLHNTVCPDCKPIRTTYFIMIFASCHFVLSHLPNFNSISGVSFAAAAMSLTYSTIAWTASVHKGVQPDVQYSYTASTTAGRVFTFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWKGVVFAYIVVAICYFPVALIGYWMFGNSVADNILITLENPRWLIAAANMFVVIHVIGSYQIYAMPMFDLLETLLVKKLKFTPCFRLRLITRTLYVAFTMFIGMLIPFFGSLLGFLGGLVFAPTTYFLPCIMWLAVYKPRRLSLSWFANWMCIVMGIILMILAPIGALRQIILQAKTFKLFS* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1350 610 Gene3D Amino acid/polyamine transporter I 195 605 - -
Vvi1g1350 610 FunFam Lysine histidine transporter 1 195 605 - -
Vvi1g1350 610 PANTHER OS05G0424000 PROTEIN-RELATED 200 595 - -
Vvi1g1350 610 Pfam Transmembrane amino acid transporter protein 199 594 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1350 Vvi-Chr1 19703167 19710688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1350 170 610 Organic Solute Cotransporters AT1G24400 75.283 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1350 - - vvi:100264875 879.011