Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1347 ATGCCTCCTTCTCCGGCATTGAGGTGCTCTCCCGGAAGGGAGCTGAGAGGAGAGAATCACAAGCGGGGGCACAGTTTTGAGACCGGATTGATTCTTAGGGAGAAAGATGATGATCTTGCTTTATTCAGTGATATGCAGACCCGGGAAAAGGACAATTTTCTGGTTCAGTCTTCGGATGATTTTGAAGACACGTTCTCAACAAAATTGAGATACTTTTCAGATTTAAAGCTTGGAATCTCAGTTCCTGCTCGAGGAGAAAGTAGCGACCTGCTTAATGCAGATGGGGAGAAGAATGACTATGATTGGTTGCTTACTCCTCCCGATACTCCTCTTTTCCCTTCACTGGATGATGAGACGACATCAACTACTGTTGCACACAGGGGCAGACCTCGGAGTCAACCCATTACCATCTCAAGATCATCCACGATGGAAAAGAGTTACAGAAGCAGTAGAGGTAGTGCAAGTCCACATCGATTAAGCCCATCTCCTCGATCTGGGAATGGTAGCTTCCAGTCAAGGGGAAGGCCATCTTCAGCACCCAATTCCAGTCCTGCTCCTAGCTTACGTCATACTACTCCCACGCGGAGGCCATCTCCTCCCCCGAGCAAATCCTCAACACCTGCTCCCAGGTCTTCTACTCCAACCCCTCGGAGGATGAGCACAGGATCGAGCAGTACTGTGGCTTCATATGGGGTAAGGGGAACATCCCCTGTAAAGACAAGTCGAGGGAACTCGGCTTCACCAAAAATAAGGGCATGGCAATCAAATATCCCAGGTTTCTCTTCAGAGGCACCACCTAATCTTCGCACTTCATTGGCTGATCGACCAGCATCTTATGTAAGGGGCTCCTCACCAGCATCCAGGAATGGTAGGGATTCATCCTCAAATGTCCGAAGACAATCAATGTCTCCTACTGCTTCTAGAAGTTCATCATATAGTCATGATCGAGACCGATTTAGCTCCCATAGTAAAGGTTCTGTGGTATCATCTGGTGATGATGATATAGACTCTCTTCAGTCTGTTCCTATGGGTAGCTCAGACCGCTCAGGATCAAGAAGAGTTGGTCCATTCCTAAATAACAGAGCTCCTGCCTTCTCCAAAAAGCCAACCAAAACGCTGTCCTCAATTTCTGCTCCAAAAAGATCCTTCGACTCTGCAATTCGGCAAATGGATCATCGAAGAAGTCCTCAAAATATGTTCAGGCCACTCTTATCTAGTGTTCCTAGTACCACCTTCTATGCAGGAAAAACAAATTCTGCACATCGTACTTTGATATCAAGGAACTCCTCAGTTACAACTAGCAGTAATGCAAGTTCTGATCAAGGAACGAGCGTTGCACTTGATACAGAAGAGAGTGAGCAAAACCAGGATGATGTGGCAAGTGAAGGGGAGAAGGCGCCATATCCTGATGTTCAGGATGAAGTATTTATTCTAGATAAGGTAGATGTGGTAAATGAAGGCATTGGGCATAAAATCAGTGTTGAATCACATCAAAGCGAGCATACCAACTTTGATCAAGGCCTTGCAGTCGAATCTGACCATGGTGACGCCTATAATCTCAGCTTTCATGACACTGCTATGGCAACCAGTGCAACTTCTGAAGCTTTGCATGTCAAGGGTGTTGTGTTGGAATTTGATAATCTTGAGAATATATTAGTTTGTTCTCAATGCGGCGGCAGATATCATGCCATTGAACCAGTTGAAAGGGAAATTAAACTTTGTCCAGATTGCAGAATGAAAGATGATCTTTTAATTGTTTCTACCCCCGTGACTAAAACGATAGTTTCTGATAACTCCCCTGCACCTTCTACGAAGATTTTGGAAGAATATAAACCATTTGATCAAATGGAGCTCCAAATGGCTGTTTCTGAATTACCAGAAACTACTGATATGGGTGAAACACAGATTTTCCCATGTGAAGAGAATGTTAGGCAAGGGCAAACTAGCCATGGTGTGCAAAGCCAGAGTCACGTGCCAGAAAATTCTCCTGCTAGGTCTCTGGAGGAGGAAGGTGAGCAGAGACTTGGAAACCAGCAAGTGATGGCCCAACCAGATGTTGGTTACTACACGCCAGATGGCAACACTAGCAATCAGCAATTGCGACACTTAAATGACTATCCAAATTTGAAAGTTGATATTTCAGAAGGTGCAGGCATTTCTGTACTGCTGCTGAAGAGGTCAAGCAGTAGCAAGGGGCCTGTTCTTCAAGGAAGGACCTTCACTGCCACGACCATATCTTATGATGATCCGTCTTATGCAAGAGACATCACTAACAGCATGAGAAGTTCTATTGGACATGGCAGTGCTTCTGCATCGTCTTCTGTTGATTTGGGCTCAGCCAAACACATGGAGACTCGTGTGCAACGGCAATTAAGTGGCAGGAAATCTGACATGGAGAATTATAAGTATGATCCAAATACAAAGCCTCAAATCACCAGTTCACCTTTCTCTGCAGTTTCAAGCCATGCTTCCCAAGCTTCAGGCCTTGCAATGAGCACACATGAAGACAATTTTGAAGTGTCTGCTGGCAATAGACAATATGCTGTTGTAGTGGAAAGACCTGTAGCTTCTCAAGGACAAGTTCTAGCTTCAGAAAATGCAGAAGTTAATGATTGGAATTCATCCTTTTCGGGGACATCAGTTCTTGAGGAGGATAATTTTGATTGCAACGAGAGTTGTAGGACAGCGGATGCTTCTACCTCAGAATTATTGAGCCATGCATTAAGCAATCAGGTACAAGACAGTTCAGCAGCATCATTTCCAAGTTGTGAAAATTGTCTCTCGTATGAGAATAGTGAAGACTTTCCAAACAACTCTAGGAGCACCCCAGACATTGAAGAATCAGTTGGGACTACAGAGTCTTGTTTTGGAGAGGAACACACCATATCTAATACTGGTGTTGATGGAGGGCCTCAAGAGGTTCCTACTCACAGCTCTTTGGTTACAGTATCAGAAATAGAAATTGAGAATGGTCATCAAAGTACCCCAGATTCACAAATTGATGCTGTTTATTCAAAGGGCGCCGTGGATGACTTTCAGGAGCCTTCAGTTTCCGCCTCTTTGGATAAAGATTTAACAGCTTTGGTTCCAGAGCCCAACACCTCAGATCATGCACATGGCATGCTAGAGGAATCGACCATAGTGGTGGAGGGCCATGGAAGAAATAGATCACGAAGCCTAACTCTAGATGAGGCCACGGATACAATACTCTTTTGCAGCTCTATTGTTCACAATTTGGCCTACCAGGCTGCAACCATTGCAATGGAGAAGGAAAATGTTGTACCACTGGAAGGTTCTCGGCCAACAGTCACCTTATTGGGGAAATCCAATTCAGACAGGAAGGAAGCACATGGCAGAAGTGCTGGGAAACGCAGTTCAAAATCCCAAAAATCAAGGCAAAGGCGGGTGGAAACAGACGCAAAACCCCCTTTGACCAACACTGAGAGTGATGAGAAAAATGATGAGTCCCTTCCACGAATTGTTGGGCTTCCAGACAAGGTTGACAGCACAAAACCTCCAAAGCTGGAATCCAAGTGCAATTGCGCAATAATGTGA 3555 0.4498 MPPSPALRCSPGRELRGENHKRGHSFETGLILREKDDDLALFSDMQTREKDNFLVQSSDDFEDTFSTKLRYFSDLKLGISVPARGESSDLLNADGEKNDYDWLLTPPDTPLFPSLDDETTSTTVAHRGRPRSQPITISRSSTMEKSYRSSRGSASPHRLSPSPRSGNGSFQSRGRPSSAPNSSPAPSLRHTTPTRRPSPPPSKSSTPAPRSSTPTPRRMSTGSSSTVASYGVRGTSPVKTSRGNSASPKIRAWQSNIPGFSSEAPPNLRTSLADRPASYVRGSSPASRNGRDSSSNVRRQSMSPTASRSSSYSHDRDRFSSHSKGSVVSSGDDDIDSLQSVPMGSSDRSGSRRVGPFLNNRAPAFSKKPTKTLSSISAPKRSFDSAIRQMDHRRSPQNMFRPLLSSVPSTTFYAGKTNSAHRTLISRNSSVTTSSNASSDQGTSVALDTEESEQNQDDVASEGEKAPYPDVQDEVFILDKVDVVNEGIGHKISVESHQSEHTNFDQGLAVESDHGDAYNLSFHDTAMATSATSEALHVKGVVLEFDNLENILVCSQCGGRYHAIEPVEREIKLCPDCRMKDDLLIVSTPVTKTIVSDNSPAPSTKILEEYKPFDQMELQMAVSELPETTDMGETQIFPCEENVRQGQTSHGVQSQSHVPENSPARSLEEEGEQRLGNQQVMAQPDVGYYTPDGNTSNQQLRHLNDYPNLKVDISEGAGISVLLLKRSSSSKGPVLQGRTFTATTISYDDPSYARDITNSMRSSIGHGSASASSSVDLGSAKHMETRVQRQLSGRKSDMENYKYDPNTKPQITSSPFSAVSSHASQASGLAMSTHEDNFEVSAGNRQYAVVVERPVASQGQVLASENAEVNDWNSSFSGTSVLEEDNFDCNESCRTADASTSELLSHALSNQVQDSSAASFPSCENCLSYENSEDFPNNSRSTPDIEESVGTTESCFGEEHTISNTGVDGGPQEVPTHSSLVTVSEIEIENGHQSTPDSQIDAVYSKGAVDDFQEPSVSASLDKDLTALVPEPNTSDHAHGMLEESTIVVEGHGRNRSRSLTLDEATDTILFCSSIVHNLAYQAATIAMEKENVVPLEGSRPTVTLLGKSNSDRKEAHGRSAGKRSSKSQKSRQRRVETDAKPPLTNTESDEKNDESLPRIVGLPDKVDSTKPPKLESKCNCAIM* 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 114 192 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 763 800 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 644 675 - -
Vvi1g1347 1184 PANTHER GASTRIC MUCIN-LIKE PROTEIN 20 1180 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 1099 1184 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 85 382 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 365 382 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 427 450 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 193 207 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 208 268 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 1 24 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 763 779 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 1131 1161 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 427 466 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 644 662 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 282 310 - -
Vvi1g1347 1184 MobiDBLite consensus disorder prediction 323 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1347 Vvi-Chr1 19670873 19678713 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1347 - - vvi:100244315 2165.96