Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1344 ATGAACCAGGACGCTGAGGCATCTTCTTCCACCACCACCTCTCATTACTCTTCTTCTTCCTCCATCCTCTCTAATTACCCGCTTCTCGCAGCTCTCCTCTCCTTCATTCTTGCTCAAACCATCAAGGTCTTCACCTCCTGGTATAGGGATAGACGATGGGATCTCAAGCAACTTGTTGGGTCTGGTGGAATGCCATCGTCCCATTCTGCAACTGTTACAGCTCTTGCTGCAGCCATTGGGTTACAAGAAGGCTTTGGAGGATCAATGTTTGCAATATCATTGGTCATAGCATGCGTTGTTATGTATGACGCATTTGGTGTGAGATTACAGGCTGGACGTCAAGCAGAGGTTCTGAATCAAATTGTTTATGAGCTCCCTGCTGAGCATCCTCTGGCTGAAAGCATACCACTGCGGGAACTTCTTGGCCACACTCCTCCTCAGGTTATTGCTGGTGCAGTGCTGGGACTTACCACAGCATCTATTGCCTATTTGATTGTGATGGCTCGAAGTCGAGCTTGA 519 0.4836 MNQDAEASSSTTTSHYSSSSSILSNYPLLAALLSFILAQTIKVFTSWYRDRRWDLKQLVGSGGMPSSHSATVTALAAAIGLQEGFGGSMFAISLVIACVVMYDAFGVRLQAGRQAEVLNQIVYELPAEHPLAESIPLRELLGHTPPQVIAGAVLGLTTASIAYLIVMARSRA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1344 172 MobiDBLite consensus disorder prediction 1 20 - -
Vvi1g1344 172 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 26 101 IPR036938 -
Vvi1g1344 172 PANTHER ACID PHOSPHATASE/VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 9 165 IPR003832 -
Vvi1g1344 172 Pfam Divergent PAP2 family 24 157 IPR003832 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1344 Vvi-Chr1 19633078 19637462 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1344 K09775 - vvi:100252740 310.457