Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1343 ATGGAGGTTTTAGGGTTTGTCAGGATGTTCAGAACGATGCCGTATCAATACACTCAAAAGAGAGGTTTTTCAGAGGTTTCCAGAAACGGTGTCTTCCCGGTTCTGATCGTCGGCGCCGGACCCGTCGGTCTCGCTCTCTCTATCCTTCTCACCAAACTTGGGGTCAAATGCGCAGTTTTGGAGAAAAGCAAAACTTTTTCTAAACATCCACAGGCGCACTTCATCAACAATCGATCTATGGAGGTGTTCAGAAAATTGGATGGCTTGGCAGATGAGATCCAAAAGTCTCAACCTCCAGTGGATTTGTGGAGGAAGTTCATATACTGCACATCACTCTATGGCTCTGTTCTTGGGTCAGTAGACCATATGCAACCTGAAGATTTTAAGCAAGTTGTCAGCCCCATCTCCGTTGCTCACTTCTCACAGTACAAACTTACCGCATTACTTCTTAAGCAGCTGGAAAATCTCAGTTTCCGTGTCCATAATTGGGAAGGGTGGGAAGGCCTTAATCATGGGCATGTCAGGGAAAAGCAGATATTGATGGGGCATGAGTGTGTATCTATGGATGCCACTGATGACTGGATTAATGTAACTGCATCTTTTCTCAAGGAGGGGAAGTGTATGAAGAGAAATATACAGTGTAGTATCCTTGTTGGTGCAGATGGTGCAGGAAGTACAGTGAGAAAACTTGCAGGAATAACCATGAAAGGTGAAGAAGACTTGCAAAAGCTAGTCAGCATTCATTTTTTGAGCAAGGAGCTTGGACAATACCTACTCAATGAGAGACCTGGGATGCTATTCTTTATTTTCAATACTGAGGCAATAGGGGTTCTGGTTGCTCATGATCTCAAGCAAGGGGAATTTGTATTGCAGACACCATTCTATCCACCTCAGCAAAGCCTTCATGACTTCAGCCCTGAGGTATGTGAGAAGTTAATCTTCAAATTGGTTGGCCAAGAGCTTGTAGACATAGATGTAATCGATATAAAGCCATGGGTGATGCATGCTGAAGTTGCTGAGAAGTTTGTATCCTGTGACAACCGAATACTACTTGCTGGTGATGCTGCTCATCGTTTCCCTCCAGCTGGTGGTTTTGGAATGAATACCGGTATTCAAGATGCTCATAATCTTGCCTGGAAATTAGCTTCTCTTGTGAAGGGTATTGCACCATCTTCAATTCTTCACACTTATGATACAGAACGTAGACCGATTGCCATTTTCAATACTGAGCTTAGTATTCAGAACTTCAGAGCAGCCATGGCAGTGCCTGCTACACTTGGTCTCAATCCAACTGTTGCAAACTCAGTACATCAAGTTATCACCAATGGCATTGGTTCCATTTTACCTTCTGGACTACAGAGGGCAGTTTTGGATGGAATTTTCACTATAGGTCGTGCACAGGTCTCAGAATCTCTTTTGAATGAAAAAAACCCAATTGGATCTTTTAGGCTTGCTAAACTAAGGCGTATATTTGAAGAAGGAAAGAGTCTTCAACTCCAGTTTCCTGCCGAGGATCTTGGTTTCAGGTATCTCAAAGGAGCACTTGTACCTGACAGTGACAGTGCACAGGATGCACTGGAAGCACCTACTGGCCGTCGGAGGGACTATATTCCCACTGGAGCTCCTGGGTCAAGGCTACCCCATATGAATGTGAGATTATTGTCAAATCTAACTAGTGAGGAGATTTGCTCTACCCTGGATCTGGTATCAGGAGATGAAGTAGAGTTCCTTCTCATTATAGCTCCAGTAAAGGAGTCCTACCAGCTAGCTCATGCCGCATTGAAGGTGGCAGAGGAATTTAAAGTTTCTGCCAAGGTCTGTGTAATGTGGCCTAGTAACACTGACACTGGAGATGAAATAAGTAGTGCAGGGGCATTGATGCCTTGGGAGAGCTACGTAGATGTGGTGGAAGTGGAAGTTAAGAGGTCATCGACAGTGAAGTTGTCGTGGTGGGATATGTGTCAGATGACTGACAAAGGAGCCATCCTAGTGAGGCCTGACGAGCATATTGCTTGGCGTGTTAAGACGGGAATTGTTGGGGATCCCATCTTGGAGATGCATCGGGTTTTCTCTGCCATTTTGTGTGTGAAGTCCTCTACAGCACCCCTCCCCCATACGCATATGTGA 2127 0.4495 MEVLGFVRMFRTMPYQYTQKRGFSEVSRNGVFPVLIVGAGPVGLALSILLTKLGVKCAVLEKSKTFSKHPQAHFINNRSMEVFRKLDGLADEIQKSQPPVDLWRKFIYCTSLYGSVLGSVDHMQPEDFKQVVSPISVAHFSQYKLTALLLKQLENLSFRVHNWEGWEGLNHGHVREKQILMGHECVSMDATDDWINVTASFLKEGKCMKRNIQCSILVGADGAGSTVRKLAGITMKGEEDLQKLVSIHFLSKELGQYLLNERPGMLFFIFNTEAIGVLVAHDLKQGEFVLQTPFYPPQQSLHDFSPEVCEKLIFKLVGQELVDIDVIDIKPWVMHAEVAEKFVSCDNRILLAGDAAHRFPPAGGFGMNTGIQDAHNLAWKLASLVKGIAPSSILHTYDTERRPIAIFNTELSIQNFRAAMAVPATLGLNPTVANSVHQVITNGIGSILPSGLQRAVLDGIFTIGRAQVSESLLNEKNPIGSFRLAKLRRIFEEGKSLQLQFPAEDLGFRYLKGALVPDSDSAQDALEAPTGRRRDYIPTGAPGSRLPHMNVRLLSNLTSEEICSTLDLVSGDEVEFLLIIAPVKESYQLAHAALKVAEEFKVSAKVCVMWPSNTDTGDEISSAGALMPWESYVDVVEVEVKRSSTVKLSWWDMCQMTDKGAILVRPDEHIAWRVKTGIVGDPILEMHRVFSAILCVKSSTAPLPHTHM* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1343 708 SUPERFAMILY FAD/NAD(P)-binding domain 32 424 IPR036188 -
Vvi1g1343 708 Gene3D - 100 341 - -
Vvi1g1343 708 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 346 361 - -
Vvi1g1343 708 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 213 228 - -
Vvi1g1343 708 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 361 377 - -
Vvi1g1343 708 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 379 397 - -
Vvi1g1343 708 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 397 413 - -
Vvi1g1343 708 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 33 55 - -
Vvi1g1343 708 Gene3D - 33 405 IPR036188 -
Vvi1g1343 708 Pfam FAD binding domain 33 405 IPR002938 GO:0071949
Vvi1g1343 708 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 31 690 - -
Vvi1g1343 708 Gene3D - 503 696 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1343 - - vvi:100251202 1417.52