Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1342 ATGAGGTCTATAGAGGACAAGGGCTGCTGCAACTATGGACCAACTAAGGATATTTCAAGTAGCAGTGCCATTAGTTTCGAGTTTCCTAAGGGGAATGGAACAAATCGAACCACTCATCATCGAACAGCCTTAGGCAAACCAACCCCATCAAAATGGGACGATGCTCAGAAATGGCTAGTGGGGTTGTCTGGAGGGGGAGAGAAAAATCAGTCCAAAACCAAGCCCAGAAACTCAAATGCGGATGACAGGAGGTTAATAGCTCCAGTCCCACAGAAAGAAAAGGATTATTCAAGCTGTGAGGATGAAGGAGAAGAAGAAGCAAATGGGTGCCCTGGCCCTGCTTCTTCAAATCAGTACCAAGTGGAAACAAAGAAGGTAGACTGTGATGAATCCTTTTGGCAAATCAACAAGGCTTCAGAAGATTCCTCATCAGCTGTTAGATCCATATGCGTGAGGGATATGGGGACTGAGATGACCCCCATTTCTAGCCAAGAGCCCTCAAGAACAGCTACTCCCATTAGAGCAACTACCCCTGTGGCTAGAAGCCCCATATCTTCTGGGTCCTCTACTCCAGGGAGGTGTTATCAGACTGGTTTGAGTTCAACAGAGAGCAGAGGCGAGGCAGCCCCTGTTGGTAGGGGGCATGGTAGGTTTAGCTCGGATGGGGAAGAATCCAATGCTTGCAAGATGCCGGAGAACAAGAATTCAGAACATGCTAGAAAGCCTAATCCTCTGGACACCCGAGCAACGGCCTGGGACGAGGCGGAACGAGCCAAGTATCTTGCAAGGTATAAGCGTGAAGAAGTGAAGATACAAGCCTGGGAAAATCATGAGAAAAGGAAAGCTGAGATGGAAATGAAAAGAATGGAGGTGAAGGCTGATAAATTGAAAGCTTGGGCGCAAGAGAAATTGGCAAACAAAATTGCTGCAACCAGGAGAATAGCTGAAGAGAAGCGTGCAAGTGCCGAAGCCAAACTGAATGAGAAAGCTGCAAGGACTTCTGAAAGGGCAGATTACATAAGGAGGACTGGTCGTTTGCCCTCTTCTTTCTACTTCAAGTTGCCTTCCCTCTGCTGGTAG 1080 0.4769 MRSIEDKGCCNYGPTKDISSSSAISFEFPKGNGTNRTTHHRTALGKPTPSKWDDAQKWLVGLSGGGEKNQSKTKPRNSNADDRRLIAPVPQKEKDYSSCEDEGEEEANGCPGPASSNQYQVETKKVDCDESFWQINKASEDSSSAVRSICVRDMGTEMTPISSQEPSRTATPIRATTPVARSPISSGSSTPGRCYQTGLSSTESRGEAAPVGRGHGRFSSDGEESNACKMPENKNSEHARKPNPLDTRATAWDEAERAKYLARYKREEVKIQAWENHEKRKAEMEMKRMEVKADKLKAWAQEKLANKIAATRRIAEEKRASAEAKLNEKAARTSERADYIRRTGRLPSSFYFKLPSLCW* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1342 359 MobiDBLite consensus disorder prediction 1 117 - -
Vvi1g1342 359 MobiDBLite consensus disorder prediction 74 98 - -
Vvi1g1342 359 Coils Coil 312 332 - -
Vvi1g1342 359 PANTHER OS02G0116800 PROTEIN 22 358 - -
Vvi1g1342 359 MobiDBLite consensus disorder prediction 217 244 - -
Vvi1g1342 359 MobiDBLite consensus disorder prediction 157 251 - -
Vvi1g1342 359 MobiDBLite consensus disorder prediction 14 44 - -
Vvi1g1342 359 Pfam Remorin, C-terminal region 246 348 IPR005516 -
Vvi1g1342 359 MobiDBLite consensus disorder prediction 157 204 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1342 - - vvi:100853782 734.561