Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1335 ATGTTGGAGGATGAGCAGAAGGCTAGTAGAGGCAAGGACATTGACAATTGGCTCCCGATCACGTCGTCCCGAGACGCCAAATGGTGGTATTCTGCATTCCACAATGTGACTGCCATGGTTGGGTCTGGTGTCCTCGCCCTCCCTTATGCTATGGCAGGGCTTGGATGGGGCCCAGGGGTGGTTATTCTTATACTTTCATGGATCATCACTTTGTACACTCTATGGCAAATGGTTGAGATGCATGAAATGGTTCCCGGGAAGCGGTTTGATAGATACCATGAGCTAGGACAGCATGCCTTCGGTGAAAAGCTTGGCCTCTGGGTTGTGGTGCCTCAACAGTTGGTTGTAGAAGTGGGTGTTGACATTGTGTACATGGTCACCGGAGGCAAATCCTTGCAGAAGTTCTACAATATTGTTTGTTCTGACTGCCGACGGCTCAGGACCACCTACTTCATCATGATATTTGCTTCTTGTCACTTTGTCCTCTCCCATTTGCCCAACTTCAACTCCATTAGCGGCGTCTCATTTTCTGCAGCAGCAATGTCCTTAACTTACTCGACTATCGCTTGGATAGGTTCAGCTCATAAGGGTGTCGTAGCAGATGTTGACTACAAATACAAAGATTCGACCACAACTGGAAAATTCTTCCACTTCTGTCATGCCTTGGGTGAAGTAGCATTTGCCTATGCTGGTCACAATGTGGTGTTGGAGATCCAAGCTACAATTCCTTCCACCCCTGAGAAGCCTTCCAAGGGACCCATGTGGAAAGGAGTCATGTTTGCTTACATGATTGTTGCCATCTGCTACTTCCCTGTTGCTTTAGTTGGGTATCGGGTGTTTGGGAACAGCGTTGCTGACAATATCCTTATCACACTCGAGAAACCCGGTTGGCTTATTGCCGCAGCCAACATTTTTGTTGTCATCCACGTTGTTGGAAGCTACCAGATATATGCGATTCCGGTGTTTGACATGATGGAAACACTCCTGGTGAAGAAACTGAAATTCACACCATGTTTCAGGCTTCGTCTTATTACCCGCACTTCATATGTTGCTTTTACGATGTTCATTGCTATGATGATCCCTTTCTTTGGTAGTCTCATGGCGTTCTTGGGAGGGTTGGCTTTTGCACCCACAACATACTTTCTCCCCTGCATCATGTGGCTTGCTGTTTACAAGCCCAAGATGTTTAGCTTATCATGGTGTTCAAATTGGATCTGCATTGTGCTGGGAGTAGTATTGATGATTTTAGCTCCCATTGGTGCACTAAGGCAGATCATCCTTCAAGCCAAGACCTACAAATTGTTCTCGTGA 1311 0.4668 MLEDEQKASRGKDIDNWLPITSSRDAKWWYSAFHNVTAMVGSGVLALPYAMAGLGWGPGVVILILSWIITLYTLWQMVEMHEMVPGKRFDRYHELGQHAFGEKLGLWVVVPQQLVVEVGVDIVYMVTGGKSLQKFYNIVCSDCRRLRTTYFIMIFASCHFVLSHLPNFNSISGVSFSAAAMSLTYSTIAWIGSAHKGVVADVDYKYKDSTTTGKFFHFCHALGEVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWKGVMFAYMIVAICYFPVALVGYRVFGNSVADNILITLEKPGWLIAAANIFVVIHVVGSYQIYAIPVFDMMETLLVKKLKFTPCFRLRLITRTSYVAFTMFIAMMIPFFGSLMAFLGGLAFAPTTYFLPCIMWLAVYKPKMFSLSWCSNWICIVLGVVLMILAPIGALRQIILQAKTYKLFS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1335 436 Gene3D Amino acid/polyamine transporter I 21 431 - -
Vvi1g1335 436 Pfam Transmembrane amino acid transporter protein 26 420 IPR013057 -
Vvi1g1335 436 PANTHER OS05G0424000 PROTEIN-RELATED 26 421 - -
Vvi1g1335 436 FunFam Lysine histidine transporter 1 21 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1335 Vvi-Chr1 19570005 19571893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1335 1 436 Organic Solute Cotransporters AT1G24400 73.624 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1335 - - vvi:100257870 886.715