Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1329 ATGGCTTCAAGAACTGCCACCAAAGACATCATCACTTTACGGGGTTCCGCCGCAATCGTCAGCGAATTTTTTGGTTATGCTGCAAACAGTATTCTATACAATCGCGGAGTTTATCCGGAAGAATCTTTTGGAAAAGTGAAGAAATATGGCCTTCCAATGCTGCTTACTCAAGATGAGGGTGTTAAATCGTTCATTGCTAACCTAACGGCTCAGCTTTCGGAATGGCTAGAAACTGGAAAGCTACAGAGGGTGGTTCTTGTAATAATGAGCAAGGCAACAAATGAGGTGTTGGAGAGATGGAACTTCAGCATTGAAACCGATGGTGAAGTCGTTGAGAATGGGGTGTCAAGGGAGAAGAGTGACAAAGAGATTATGAGAGAGATACAAGCAATCATGCGACAGATTGCTTCCAGCATCACTTATTTGCCATGCATCGATGAACCCTGTGTGTTTGATGTGTTAGCATACACTGACACGGATGTTGCAGTTCCATTCACCTGGATTGAGAGTGACCCCAAACTGATTGCCAATCCACAGATGGTGAAACTGCATTCTTTTGATACCAAGATACACAAGGTTGACACTCTTGTTTCATACAAGAACGATGAATGGGATGAGGATTAG 624 0.4343 MASRTATKDIITLRGSAAIVSEFFGYAANSILYNRGVYPEESFGKVKKYGLPMLLTQDEGVKSFIANLTAQLSEWLETGKLQRVVLVIMSKATNEVLERWNFSIETDGEVVENGVSREKSDKEIMREIQAIMRQIASSITYLPCIDEPCVFDVLAYTDTDVAVPFTWIESDPKLIANPQMVKLHSFDTKIHKVDTLVSYKNDEWDED* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1329 207 ProSiteProfiles HORMA domain profile. 14 197 IPR003511 -
Vvi1g1329 207 SUPERFAMILY The spindle assembly checkpoint protein mad2 10 203 IPR036570 -
Vvi1g1329 207 PANTHER MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 5 201 IPR045091 -
Vvi1g1329 207 FunFam Mitotic spindle checkpoint protein MAD2 1 203 - -
Vvi1g1329 207 Gene3D HORMA domain 1 203 IPR036570 -
Vvi1g1329 207 Pfam HORMA domain 16 191 IPR003511 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1329 K02537 - vvi:100254488 412.92