Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1324 ATGGCATTAAATTTTTCGCACCGTCCGATCTTCCCGGCGCATTTGGCCGAAGACAATTTGGTTTCGCCCATTAGGATTGCTAATGGGTATCTTGTGGAGGGGATACTAGATAAGAATGGAGATGGGTTCTGTAAGCCGTGGCATTCGAATAGGGAGGTTGCAGATTGCTTTGATTATGGGAGGGATAGAGATGATAGGGGTGGCTCGCAACAGGAGTCAGTGTCGAATGACATTCTTGATCTTTTGCCTTCAGATCCCTTCGGGATGGATATAAGTACTACTTTCACGGCAATTACTGGTTGGCTTGAAGATTTGGAGGTAGATTATGGTGGGTACGGAACAGATGAGATTGGAACGAGTCAGGGGAATTATGAGTTGTTCGCTGGATTGAATTTTATATGGAACAATGCTATGAGGTTCCAGGCATTGCCTGGGAAAGCATGGTTGGATGATAAATCTGATATAGCATGTGGGTTTGGTGGGTTCACTGAGGAAAAGGAAGTGGCTGACCCATCTTACAATTGTAGGTTTGGGCCAATCTGTGTTGTGGAAGATGTTCTGAGTTCTGGGAATGAAAATGTTTGTGGTGCCAGCTGTCAAGCTGAAGAATTCCGGGAGTTTAATGGAAGTTGTTATGATGGAGATGGGGCAGCTCCTCATGCAGCTGTTTCTTTTGCCCTTGGTTATCTAGGTTTGAGGGACCTACTTTCTGTTGAAAGGGTTTGTAGATCTCTGCGAGCTACTGTTCAAAGTGATCCCCTTTTGTGGAGGAGTATCCATGTAGACCAGCCATTGAACGAGAGGATTACAGATGATATTCTTTTACAACTAACTAGGAGGGCTCAAGGCAACCTGCAGGGCTTACACCTGGTGGAATGCCCAAGAATTACAGATGATGGTCTGAAGCGAGTTCTTGAAAGTAATCCAAGGTTAACCAAGCTGTGTGTGCCTGGATGTACAAGACTCAGTATTGAGGGAGTTGTAAATATGCTAAGAGCTTTCCAGTCTACTGGTACGCCGGGTATAAAGCACCTAAGAATTGGTGGACTCTATGGTGTGGCACACAAGCATTTTGAAGAGTTGAAGCTCTTGCTGGGCATTGATATTCATGAACAGAAGAATGCTCACAAGCCTCATTTTTATAATAGGGGAAACTTTTATCTCTTGGGTGACGATGATCGTGCCATTGATATTGAAACGTGTCCAAGATGCCAGAATTTGAGGCTGGTTTATGATTGCCCAGCAGATGGTTGTCAAGTGAAAGAAAATGCTGCTCAGGTATGCAGGGCTTGCACACTTTGCATTGCACGATGTGTTCAGTGTGGACGCTGCATTAATGACGGTGAATATGAAGAGACATTTTGTCTGGAATGGCTTTGCTCAGATTGTTTTAAGCAGCAACCGCAGTGCCAAGAGACTTCTAACTTATGTCTTCACGGCTAG 1443 0.447 MALNFSHRPIFPAHLAEDNLVSPIRIANGYLVEGILDKNGDGFCKPWHSNREVADCFDYGRDRDDRGGSQQESVSNDILDLLPSDPFGMDISTTFTAITGWLEDLEVDYGGYGTDEIGTSQGNYELFAGLNFIWNNAMRFQALPGKAWLDDKSDIACGFGGFTEEKEVADPSYNCRFGPICVVEDVLSSGNENVCGASCQAEEFREFNGSCYDGDGAAPHAAVSFALGYLGLRDLLSVERVCRSLRATVQSDPLLWRSIHVDQPLNERITDDILLQLTRRAQGNLQGLHLVECPRITDDGLKRVLESNPRLTKLCVPGCTRLSIEGVVNMLRAFQSTGTPGIKHLRIGGLYGVAHKHFEELKLLLGIDIHEQKNAHKPHFYNRGNFYLLGDDDRAIDIETCPRCQNLRLVYDCPADGCQVKENAAQVCRACTLCIARCVQCGRCINDGEYEETFCLEWLCSDCFKQQPQCQETSNLCLHG* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1324 480 Gene3D Ribonuclease Inhibitor 265 362 IPR032675 -
Vvi1g1324 480 SUPERFAMILY RNI-like 268 355 - -
Vvi1g1324 480 Gene3D - 219 259 - -
Vvi1g1324 480 SUPERFAMILY F-box domain 225 260 IPR036047 GO:0005515
Vvi1g1324 480 Pfam F-box-like 228 260 IPR001810 GO:0005515
Vvi1g1324 480 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 125 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1324 Vvi-Chr1 19480236 19483305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1324 - - vvi:100266542 1002.28