Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1318 ATGGCAACCCTCTTTCCCCCGAGTGATCATCTGCATGTGATCATGCCATCTGGTTTGTTTAGTAAGCAGAAGATTGTAACTAAGAGGTTTGTGTTTGATGCAACCAGCTTAGCCACTCTAAAAGGCAGAGCTGCTAAGGCCACCTGCATGAACAACCCGACTCGCATTGAAGCCATCACAGCTCTTCTCTGCCATGCGTTTGGCAATCTCTGGCGTAACGCCATTGCTTCAATAGCAGAGGGCAACAACAAGATAGAGCTGCCTGATATAGTTGTTCAGCTGAGGACAGCCACAAGGAAGATCAATAAAGAGTACGTGAGGAAACTTCAAGGTGAAGATGGGCTATCACAGGCTATTGAATCTCTGAAAGAAGTAAGTGAAATGGTGACCAAAGGGCAGGTTGAGTTTTACAGGTCTGGCAGTTGGGTGAGATTTCCATTTTACCAGACTGATTTTGGATGGGAAAAGCCTATGTGGGTATGCACCAGCAATGCGCCTATTAAGAATGTTGTTATCTTGATAAAAGCACGAGGTCCGGTGATGGAAAAGAGGCATGGGTATCGATGGATGAACAACACATGA 582 0.457 MATLFPPSDHLHVIMPSGLFSKQKIVTKRFVFDATSLATLKGRAAKATCMNNPTRIEAITALLCHAFGNLWRNAIASIAEGNNKIELPDIVVQLRTATRKINKEYVRKLQGEDGLSQAIESLKEVSEMVTKGQVEFYRSGSWVRFPFYQTDFGWEKPMWVCTSNAPIKNVVILIKARGPVMEKRHGYRWMNNT* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1318 193 PANTHER F21J9.9 65 176 - -
Vvi1g1318 193 Gene3D - 66 186 IPR023213 -
Vvi1g1318 193 Gene3D - 22 65 IPR023213 -
Vvi1g1318 193 Pfam Transferase family 94 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1318 Vvi-Chr1 19365408 19366095 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1318 - K13065 vvi:104880695 394.815