Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1314 ATGGATGGAATCAAATATGCAGTATTTATAGACAAAAGTATTCGGTTATTGGGGAAAAATCAATATACTTCTAATGTCGAATCAGGATCAACTAGGACAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCGGGAAAGGGTAGAAGAATGGGACAACAGATTCTTTAA 204 0.3676 MDGIKYAVFIDKSIRLLGKNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGQQIL* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1314 67 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 60 IPR013025 GO:0003735|GO:0005840|GO:0006412
Vvi1g1314 67 Pfam Ribosomal protein L23 6 65 IPR013025 GO:0003735|GO:0005840|GO:0006412
Vvi1g1314 67 FunFam 50S ribosomal protein L23, chloroplastic 1 67 - -
Vvi1g1314 67 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 65 IPR012678 GO:0003735|GO:0005840|GO:0006412
Vvi1g1314 67 Gene3D - 1 66 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1314 Vvi-Chr1 19287883 19288086 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1314 K02892 - fve:10251608 128.642