Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1306 ATGGGTGAATCTGCTTGTCTCAGAAGATCATTTTCTGACAGTTCCAGTGATCCTAGAATGGGAGATGCCATCCGTGCCCTAGGAGATTCGATCTCATTTGGGAGATTCATGTCTGAATCATTGGCATGGGAGAAATGGTCATCTTTCTCTCAGAACCGCTACTTAGAAGAAGCTGAAAAATTTTCCAAGCCTGGTTCTGTTGCCCAGAAAAAAGCATATTTTGAAGCCCATTACAAGAGAATAGCTGCCAAGAAAGCAGCCGAAGCAGAAGCAGCCGCTAATGATTTTCCGGAACCAGAAGCTTTAGATGAGATTCACAATACCTCCTCAGATGATTTGGACACTGTGAAAGAGAACAGTCACATGATAATTGATGAATCAGAGGGACAAGAAGCCCTTAATACTAATACAGTTGTGGATGAGATCCACAATAGCTCCTCAGATGAATTGGACACTTTGAAAGAGAATAGCCCCATGATTATTGATGAACCAGAGGGACAAGAGGAGGCCCCCAATACTCAGCTAGTTGTTGATTGTGTGGAAAAGATTGAATTGGAAGAGGTAAAAGTAGAGGAAGTAGAGGAAGCAGAACCAGTGACAGTACAAACTGTTATAGAGGAGAGTCCTCGTGCTCAAACTGAATTTTCAGACCAGATTGAAAATGTTGAAGAAGAGAGGATGCCCCTTAAGGAGGTTGCTGATGAGGAGAAGAATCTGGCTTTGAGGAGTAACAAGAAGCTAGCCAAATCTTCCTCTAAGTCATCGACTCAAGGCCGAGCATCCAAGCTTGGAGCTTCTCCTGCAAAAGTAACATCCTTGGCTCATGTCAGAAAAGAAAACAATGCCAGTCCAAGCACCAAGAAGCCTGCACCAGATGCTCTGAACAAGAAGAGGTTTACTCCAAAATCACTTCACATGTCGATTAACTTTGCCTCTCTTGCTGGTGAAACCAGCAAAAAGGCGTCTCCTGTTCTTCAAAAGAATAGAAATTCAAGAATTAATGCAATTGCTGCCAAAATAACCGAAGAGAGCTCAACTCCCAGACGAACAACAATTAGGGCATCCATGAGTGGGATATCAAAGCATACTTCAGCAACAACCCCTCAGTCAGAAAATAGAAGGACCAGAACTCTACTTGATCAGTCAGTTTCTGGGAACAGAACAGCTGAAGGGAAATGGCAGTCACTCTTGGCAGAGCGACCACAACCTTCAGTTGCATGCGGAAGCAAATCAAGGTCTCCTATTATATCTTCTCCGTTTAGATTCAGGAGTGAAGAAAGAGTAGCAAAACGCAAAGAGTTCTTTCAGAAACTAGAAGAGAAGAATGCCAAGGAGGCAGAGAAAATGCAGCTGCAGACAAAATCTAAGGAAAAACCCGAGACTGATCTGAAAAAACTGCGCCGCAGTATTACCTTCAAAGCCATACCAACTACAGATTCTTGCCGTGAAACAGAATCACCCGGTAATCACATGATGAAGGAGAAAGGTGAGAGCAATCTTAAAAAACTGAGACACAGCATTACCTTCAAACCAGGTTCTTGTCGTGAAACAGACTCACCTGGTAATCACATGAAGAAGGAGAAAGGTGAGAGCGAGCTTAAAAAACTGAGACACAGCATTTCCTTCAAACCAGGTTCTTGTCGTGAAACAGACTCACTTGGTAATCACATGAAGAAGGTAACTAAACCTATTAGTAATCCAGTGGTTTGTTGTCTTCATTGCAATTTATACACTCCATGGAAAGGGTGA 1749 0.4288 MGESACLRRSFSDSSSDPRMGDAIRALGDSISFGRFMSESLAWEKWSSFSQNRYLEEAEKFSKPGSVAQKKAYFEAHYKRIAAKKAAEAEAAANDFPEPEALDEIHNTSSDDLDTVKENSHMIIDESEGQEALNTNTVVDEIHNSSSDELDTLKENSPMIIDEPEGQEEAPNTQLVVDCVEKIELEEVKVEEVEEAEPVTVQTVIEESPRAQTEFSDQIENVEEERMPLKEVADEEKNLALRSNKKLAKSSSKSSTQGRASKLGASPAKVTSLAHVRKENNASPSTKKPAPDALNKKRFTPKSLHMSINFASLAGETSKKASPVLQKNRNSRINAIAAKITEESSTPRRTTIRASMSGISKHTSATTPQSENRRTRTLLDQSVSGNRTAEGKWQSLLAERPQPSVACGSKSRSPIISSPFRFRSEERVAKRKEFFQKLEEKNAKEAEKMQLQTKSKEKPETDLKKLRRSITFKAIPTTDSCRETESPGNHMMKEKGESNLKKLRHSITFKPGSCRETDSPGNHMKKEKGESELKKLRHSISFKPGSCRETDSLGNHMKKVTKPISNPVVCCLHCNLYTPWKG* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1306 582 MobiDBLite consensus disorder prediction 510 530 - -
Vvi1g1306 582 MobiDBLite consensus disorder prediction 1 20 - -
Vvi1g1306 582 MobiDBLite consensus disorder prediction 99 114 - -
Vvi1g1306 582 MobiDBLite consensus disorder prediction 193 302 - -
Vvi1g1306 582 MobiDBLite consensus disorder prediction 479 498 - -
Vvi1g1306 582 MobiDBLite consensus disorder prediction 355 388 - -
Vvi1g1306 582 MobiDBLite consensus disorder prediction 244 262 - -
Vvi1g1306 582 MobiDBLite consensus disorder prediction 217 243 - -
Vvi1g1306 582 Pfam Targeting protein for Xklp2 (TPX2) domain 420 476 IPR027329 -
Vvi1g1306 582 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY-RELATED 1 501 IPR044216 -
Vvi1g1306 582 MobiDBLite consensus disorder prediction 91 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1306 Vvi-Chr1 19215455 19219755 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1306 - - vvi:100251196 991.49