Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1297 ATGGAAGATCACACTGTTATTTTAACAACTCTAAATGAAGCGTGGGCAGCCCCAGATTCAGTTATTGATCTTTTCCTTGAGAGCTTTAGGATTGGAGATCACACCCGAGTTGATTTCTCTGGGGAGGCATACTTTATGACTTCTGACTACTTGAAGATGATGTGGAGACGGATTGATTTCCTGCGGTCTGTTCTTGAGATGGGGTACAACTTCATTTTCTCGGATGCTGATATCATGTGGTTCAGGGACCCATTTCCACACTTTTTGCCAAATGCTGATTTCCAGATTGCATGTGATCATTTCTTAGGCGACCCTTACAATGTAAATAACAGACCTAATGGAGGCTTTAATTATGTAAGGTCAAACAACCGGTCCATAGAGTTCTATAAGTTCTGGTATTCTTCAAGAGAAACCTATCCTGGACTGCATGACCAGGATGTGCTTAATATCATAAAATTTGATCCTTTTATCATGAATATTGGATTGGAGATGAGATTCTTGGATACTGCACACTTTGGGGGGCTCTGTGAACCAAGCAAAGACTTGAATCTAGTATCTACCATGCATGCAAATTGTTGTTTCGGTTTGGAAAGCAAGCTTCATGATCTTAGAATTATGCTTCAGGATTGGAAAGAATATATGTCTTTGCCTCCAAGCTTAAAGAGGTCATCAGAAGCCACCTGGAGGGTTCCTCAAAACTGCAGTCTTGATGCTCTACAATCAATTCAGCTGTACGATTCAAAGGACAAGTACCTTCAAACAGGATAG 768 0.4076 MEDHTVILTTLNEAWAAPDSVIDLFLESFRIGDHTRVDFSGEAYFMTSDYLKMMWRRIDFLRSVLEMGYNFIFSDADIMWFRDPFPHFLPNADFQIACDHFLGDPYNVNNRPNGGFNYVRSNNRSIEFYKFWYSSRETYPGLHDQDVLNIIKFDPFIMNIGLEMRFLDTAHFGGLCEPSKDLNLVSTMHANCCFGLESKLHDLRIMLQDWKEYMSLPPSLKRSSEATWRVPQNCSLDALQSIQLYDSKDKYLQTG* 256
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1297 255 PANTHER EXPRESSED PROTEIN-RELATED 1 36 IPR044821 -
Vvi1g1297 255 Pfam Nucleotide-diphospho-sugar transferase 27 203 IPR005069 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g1297 Vvi-Chr1 19129886 19141980 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1297 - - vvi:100263129 523.472