Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1266 ATGACTGGCACATCAGAAGACCCACAGCACAATCAACAGTCTCCTCCATCTCCCAGGGCCAAAGAGTCAGATTCTCATCATCAATCACCATCATCCTCATCTTCTTTGCATCAATCTTCTGATGAGGACGCCAAGAAATGGGGAACCCATGTGATGGGGGCACCAGCAGTGCCCACTGTGCACCCAGACAACCAGAAGGCAGCCCTGTGGAGGGCTGATGAGCACCAGCATACCTACCACCAGCCTTATGTTCAGTACTCCCCTGTTGAGAAGCCCAGCAACAACCCTTTTGAGCCTGTCATTCACACCTTCAATTCATGGAGCAGAAAGGCTGAAACCATTGGCAGAAACATCTGGCACAACTTGAAGATGGGGCACTCGGTGTCGGAAACTGCATGGGGGAAGGTAAATTTGACGGCAAAGGCGATCACAGAAGGTGGGTTTGAGTCTCTCTACAAGCAGACTTTTGCAACAGATCCAAATGAGAAGCTGAAGAAGACTTTTGCCTGTTATCTGTCTACCTCTACCGGCCCTGTTGCCGGTACCCTCTATCTGTCAACTGCTTGTGTGGCTTTCTGCAGTGACCGTCCCTTATCCTTCACCGCTCCATCTGGGCAGGAGGCTTGGAGCTACTACAAGGTTGTGATACCTTTGGGGAACATAGGCACCGTCAACCCAGTGGTTATGCGAGAAAATTCATCTGAAAAATACATCCAGATTCTGACCATTGATGGGCATGACTTCTGGTTCATGGGGTTCGTTAATTTTGAGAAGGCGGTGCATCATCTCTTAAGCAGCACCTCAGAGTTCAGAGCACATGAAAATGCAGTAAGACCAGTAGCTGGCGCATCATCCTAG 858 0.4977 MTGTSEDPQHNQQSPPSPRAKESDSHHQSPSSSSSLHQSSDEDAKKWGTHVMGAPAVPTVHPDNQKAALWRADEHQHTYHQPYVQYSPVEKPSNNPFEPVIHTFNSWSRKAETIGRNIWHNLKMGHSVSETAWGKVNLTAKAITEGGFESLYKQTFATDPNEKLKKTFACYLSTSTGPVAGTLYLSTACVAFCSDRPLSFTAPSGQEAWSYYKVVIPLGNIGTVNPVVMRENSSEKYIQILTIDGHDFWFMGFVNFEKAVHHLLSSTSEFRAHENAVRPVAGASS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1266 285 SMART gram2001c 150 228 IPR004182 -
Vvi1g1266 285 Gene3D - 148 268 IPR011993 -
Vvi1g1266 285 MobiDBLite consensus disorder prediction 1 44 - -
Vvi1g1266 285 PANTHER GEM-LIKE PROTEIN 2 50 270 IPR037848 -
Vvi1g1266 285 CDD PH-GRAM_GEM 161 269 - -
Vvi1g1266 285 MobiDBLite consensus disorder prediction 1 19 - -
Vvi1g1266 285 Pfam GRAM domain 152 261 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1266 Vvi-Chr1 18388572 18389655 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1266 - - vvi:100248212 572.392