Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1258 ATGAAAGGAAAGGGCGGGGCACCAGGAACCTACTTCCTGTTGAATACCAAAGCAAAAATTCCTGCTATAGGTCTGGGGACATGGCAGAGTGGAGGGGACCTTTGTGTTGAAGCTGTAAAAAGGGCGTTGTCAGAGGGTTATCGTCAAATAGATTGTGCCCATCTTTATGGGAATGAGGTTGAAGTCGGGGAAGCACTGGCTGAGGCTTTCAATGGTTCACTGAAGAGGGAGGATGTTTTTTTGACTTCTAAGCTGTACTGCACGATGAATTCGCTCAATAAAATTGAGAATTCTGTTAGAGTTTCTCTTAAGAACTTAGGAGTTACATACTTAGATCTCTATTTGATGCATTGGCCAGACATTACAGCGTTTGGTGATGCTACGGATCCTCCTTCCAATTCTGGAAATGACCATAGGCAGTTTTTGAACCGATTGAAGAAAGCATGGAAAGCTATGGAGGGTCTGATTGAGTTGGGTCTGGTTCGAGCTATTGGAGTTAGCAATTTTGGGGTTCAGCAGATTAAGGAACTGCTTAAATTCGCAAAGATTGTACCCGCGGTAAATCAGGCAGAATTGCATCCTTTCTGGAGGCAAGATGAGCTCGTGAAGTTTTGTCAATCAAAGGGCATCCATGTATCTGCTCACACACCTTTAGGAGTACCAGCTTCTGGTCCTGGACCATCCGATAGTGGATCAGGTGGAGAAGATGAACCTGGAACTCCCCGGATATCATTCAGGAGGTCAAGATCAGTTCATGGGCCGATGTTGAAATTGTCGGTTGTTGCAGAAATCGCAGATAGACATAAAAAGACACCCGAGCAGGTATTTTTCATAGAGTGTCCTTGA 846 0.448 MKGKGGAPGTYFLLNTKAKIPAIGLGTWQSGGDLCVEAVKRALSEGYRQIDCAHLYGNEVEVGEALAEAFNGSLKREDVFLTSKLYCTMNSLNKIENSVRVSLKNLGVTYLDLYLMHWPDITAFGDATDPPSNSGNDHRQFLNRLKKAWKAMEGLIELGLVRAIGVSNFGVQQIKELLKFAKIVPAVNQAELHPFWRQDELVKFCQSKGIHVSAHTPLGVPASGPGPSDSGSGGEDEPGTPRISFRRSRSVHGPMLKLSVVAEIADRHKKTPEQVFFIECP* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1258 281 PRINTS Aldo-keto reductase signature 42 66 IPR020471 GO:0016491
Vvi1g1258 281 PRINTS Aldo-keto reductase signature 152 169 IPR020471 GO:0016491
Vvi1g1258 281 PRINTS Aldo-keto reductase signature 186 215 IPR020471 GO:0016491
Vvi1g1258 281 PRINTS Aldo-keto reductase signature 101 119 IPR020471 GO:0016491
Vvi1g1258 281 PIRSF AKR 239 278 IPR020471 GO:0016491
Vvi1g1258 281 PIRSF AKR 7 229 IPR020471 GO:0016491
Vvi1g1258 281 MobiDBLite consensus disorder prediction 215 246 - -
Vvi1g1258 281 ProSitePatterns Aldo/keto reductase family signature 2. 152 169 IPR018170 GO:0016491
Vvi1g1258 281 Gene3D - 5 277 IPR036812 -
Vvi1g1258 281 FunFam Uncharacterized protein 5 277 - -
Vvi1g1258 281 Pfam Aldo/keto reductase family 23 275 IPR023210 -
Vvi1g1258 281 PANTHER ALDO/KETO REDUCTASE 11 276 - -
Vvi1g1258 281 SUPERFAMILY NAD(P)-linked oxidoreductase 11 276 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1258 Vvi-Chr1 18103757 18106134 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1258 K00002 - vvi:100249597 530.791