Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1257 ATGGTGGGGACGCTACAACGACTAGGTATTGCTTATGAAGGAAAGGAAGGCCAGAAGGACGAAGCGATGTTGCTGAAGCCCATTATGACAAAAACCTTTGCGGAAGTGATCAAACAGCCGAAGAGCAAAGGAAGAGCAGTGGTTAAGGTGGAGGTCATTTTACGGTGGGGACTGCAGAGAGGGACCAGTGTTCTACCTTGTAGTCTGAAGGCTGATCGGATCAGGAAAAACATAGACATCTTCAGTTGGTCTCTGTCAGATGATGAGTGTAACTGCCTGAACCAGATAGAACCTCAAGTATGTTTATTTGGAAACGGTCCTCTGAATAACCTCCCAAACAGTGGCTTTATGCCTGGAAGTGGCCCCCTTCAGTCTGTGCGCGAGATGGAAGACGACGTGGAGTCCAATACTTGA 414 0.4807 MVGTLQRLGIAYEGKEGQKDEAMLLKPIMTKTFAEVIKQPKSKGRAVVKVEVILRWGLQRGTSVLPCSLKADRIRKNIDIFSWSLSDDECNCLNQIEPQVCLFGNGPLNNLPNSGFMPGSGPLQSVREMEDDVESNT* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1257 137 SUPERFAMILY NAD(P)-linked oxidoreductase 50 102 IPR036812 -
Vvi1g1257 137 Gene3D - 3 108 IPR036812 -
Vvi1g1257 137 MobiDBLite consensus disorder prediction 113 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1257 Vvi-Chr1 18083040 18091723 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1257 K00002 - vvi:100249597 169.859