Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1254 ATGGGTTCACTGAACGGAGATGGTATCGCTGGCTATGACATGGCTGGAGAATATGAAAGAAAGGGCGAGAAAAATAGTAAAGAGGATATTTCAGGTGGATACGTTTGCGAAAATTTCTCCAGTTCCGAGATTTTCTCAGACGGGGGAGGTTTGATTTCCGATGATAGTGGAAAACAGGAAGCAAAGCGATGTCCGTTGGATATGATAAAAGATTCACAGGAAGCTATGGAATTGGATCAACAATTCTCTGAAATCGAGATCGAGAAGAGACACGTACCTGTTGAAGATCGTCAGGACATGTCTATAATGACGGAAAATTTGAATGAAGTTCAGAATGTTCCATTAGAGGACCTTGGCTCCGGTGCTGATACAGCCGTTAGCTCCGAAACCAACGGCGATGAACAGATCATTCCTCCTCATTCGCAGCTACCAAAGCCAGAGGCACCACCGGGACTCTTGAATCCTCCATCGATGGAAGATTATTATCGAGTAGAGCGATCGCAGTCCTTAACGGAGAACTTGCCAGCAATTGGTAAATACATCCGAGACCGGAGCAATAGCTTATCGGCGGCAATCGTCAAGCGGATATCGTCTTTCAAAGAGAGCGATGAATCGAAATCGAAGTGGAATAATGTGACAGAGTTCAATCTCTCGGGACTCAAGGTGATCGTGAAGCAGAAGGATGAAAACAGAGACTTCGCGCTCAAAGGTCGAATCAGTTTTTTTTCCAGATCGAATTGCAGGGACTGTACTGCGGTTCGATTGTTCTTCAGAGAGAAAGGTCTTAAATTCGTGGAAATCAACGTCGATGTGTATCCGTCGAGAGAGAAAGAGCTGATGGAAAGAACTGGGACGTCGTCCGTACCACAGATTTTCTTCAACGAGAAGTTCTTTGGAGGTCTGGTGGCTCTGAATTCGCTTCGGAACAGCGGGGACTTTGACCGTAGGCTGACGGAGATGCTCGGGAGGAAATGCCCCGACGACGCCCCAGCACCACCGGTGTACGGTTTCGACGATTACGAGGAAGATACCACCGACGAGATGATCGCGATAGTTAGGGTTTTGCGGCAAAGACTGCCAATTCAAGACCGTCTGATGAAGATGAAAATCGTGAACAACTGCTTCGCCGGCGCTGAGATGCTGGAGGTGATGATTCAGCACTTCGATTGCGGCAGGAAGAAGGCCATTGAGATTGGGAAGCAGTTGGCTAGGAAGCACTTCATCCATCATGTCTTCAGGGAACATGATTTTGAGGCTGGAAATCATTTCTACCGTTTCCTTGAGCATGAGCCTTTTATTCCTAGATGTATCAATTTTCGGGGATCAACAAATGACAGTGAGCCCAAAACCGCTGCTGCAGTTGGCCAAAGGCTCACCAAGATAATGTCCGCAATTCTTGAGTCTTACACCTCTGATGACAGGCGCCATGTTGATTATATGGGAATTAGCAACAGTGAGGAATTCCGGAGATATGTAAATTTGGTTCAGGATCTTCACCGGGTAGACATCCTAGCACTCTCAACAGATGAGAAACTGGCCTTCTTCTTGAACCTGTACAATGCCATGGTCATCCATGCAGTGATTAGAGGAGGGCGTCCAAATGGGGTCATTGACAGGAGATCCTTCTTTTCTGACTTCCAGTACCTTGTAGGAGGCAATGTCTACTCCCTCAACATAATTAAAAACGGGATCCTCAGAAATAATCGGAGATCACCATACTCCTTAATGAAACCCTTCAGCAATGCTGACAAGCGCATAGAGCTGGCCCTTCCAAAAGTGAATCCATTAATCCATTTTGGACTCTGCAATGGAACAAGATCAAGCCCCTCGGTCAGGTTCTTCTCACCCAAAGGGGTTGAAGCAGAACTAAGATGCGCTGCAAGAGAGTTCTTCCAGAGGGACGGGATAGAGGTGGACTTGGACAAAAGGACAGTCCATCTTAGCCGGACCCTCAAGTGGTTCAATGCAGATTTTGGACAAGAGAAAGAGGTCCTCAAGTGGATCATGGATTACTTGGATGCAACTAAAGCAGGTCTGTTAACTCATCTGTTGAGCGATGGAGGAGCCGTTAATGTGGCATACCACAATTATGATTGGTCCGTGAATTCCTGA 2112 0.4678 MGSLNGDGIAGYDMAGEYERKGEKNSKEDISGGYVCENFSSSEIFSDGGGLISDDSGKQEAKRCPLDMIKDSQEAMELDQQFSEIEIEKRHVPVEDRQDMSIMTENLNEVQNVPLEDLGSGADTAVSSETNGDEQIIPPHSQLPKPEAPPGLLNPPSMEDYYRVERSQSLTENLPAIGKYIRDRSNSLSAAIVKRISSFKESDESKSKWNNVTEFNLSGLKVIVKQKDENRDFALKGRISFFSRSNCRDCTAVRLFFREKGLKFVEINVDVYPSREKELMERTGTSSVPQIFFNEKFFGGLVALNSLRNSGDFDRRLTEMLGRKCPDDAPAPPVYGFDDYEEDTTDEMIAIVRVLRQRLPIQDRLMKMKIVNNCFAGAEMLEVMIQHFDCGRKKAIEIGKQLARKHFIHHVFREHDFEAGNHFYRFLEHEPFIPRCINFRGSTNDSEPKTAAAVGQRLTKIMSAILESYTSDDRRHVDYMGISNSEEFRRYVNLVQDLHRVDILALSTDEKLAFFLNLYNAMVIHAVIRGGRPNGVIDRRSFFSDFQYLVGGNVYSLNIIKNGILRNNRRSPYSLMKPFSNADKRIELALPKVNPLIHFGLCNGTRSSPSVRFFSPKGVEAELRCAAREFFQRDGIEVDLDKRTVHLSRTLKWFNADFGQEKEVLKWIMDYLDATKAGLLTHLLSDGGAVNVAYHNYDWSVNS* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1254 703 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 79 702 - -
Vvi1g1254 703 SMART DEP_3 355 428 IPR000591 GO:0035556
Vvi1g1254 703 Pfam Glutaredoxin 241 297 IPR002109 -
Vvi1g1254 703 Gene3D Glutaredoxin 235 321 - -
Vvi1g1254 703 ProSiteProfiles Glutaredoxin domain profile. 227 324 - -
Vvi1g1254 703 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 359 426 IPR000591 GO:0035556
Vvi1g1254 703 CDD GRX_DEP 237 309 - -
Vvi1g1254 703 MobiDBLite consensus disorder prediction 121 148 - -
Vvi1g1254 703 SUPERFAMILY Thioredoxin-like 236 319 IPR036249 -
Vvi1g1254 703 Gene3D - 344 477 IPR036388 -
Vvi1g1254 703 SUPERFAMILY "Winged helix" DNA-binding domain 346 446 IPR036390 -
Vvi1g1254 703 CDD DEP 347 425 - -
Vvi1g1254 703 Pfam Protein of unknown function, DUF547 506 630 IPR006869 -
Vvi1g1254 703 MobiDBLite consensus disorder prediction 123 137 - -
Vvi1g1254 703 ProSiteProfiles DEP domain profile. 355 428 IPR000591 GO:0035556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1254 Vvi-Chr1 18012480 18021409 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1254 - - vvi:100263256 1404.42