Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1251 ATGACCAACTCAAACCCACCTCTCTTGCAACATTATGGAGTTCTTTGCCAACACGGAGAAACTCCTGCAGTTCAGCAACGTGATTGTGGGAACAATGGAGCTGCCATGGAGGAATGCCAGCTGCCATTGATAGATCTTGAGGGCCTGTGGAGTGAGAGTGAAGAGGAGAGGCTGGCCTGCGCATCAGCAATTGGTAGGGCGTCATCCAAGTGGGGATTCTTCCAAGTGGTGAACCATGGGATCAGGCCTGAGCTGCTGAGTGAGATGAGGAGAGAGCAAGTGAAGTTGTTTGAGACACCATTTGAAAGGAAGGCTGCTTGTCAGCTTCTGGATAATTCATACAGGTGGGGAACTCCAACTGCTACTTGTCCCAAGGAGCTCTCTTGGTCTGAAGCTTTCCACATTCCTCTCACTAAGGTTTCAGAAGAAGCTTGCTATGGAGAGTTTTGCTCCCTGAGGGAAGTGATGCAGGAATTTGCAAAGGCCATGTCAAACCTTGCAAGGTTGCTTGCAGGAGTTCTAGCAGAGAGTTTGGGACACCAGAAGGGAGTGTTTGATGAAATTTGCGACGAAAACACCTGCTTTCTTCGCTTGAATCGCTACCCTCCCTGTCCAGTATCGCCAGAGGTGTTTGGCTTAGTCCCGCACACTGACAGTGATTTCCTCACAATACTTTACCAGGATGAAGTCGGTGGACTTCAACTCATGAAGGATTCCAAATGGGTAGCTGTTAAACCAAATAAAGACACACTTATTGTCAACATTGGCGATCTTTTTCAGGCGTGGAGCAACAATGAGTACAAAAGTGTAGAGCATCAGGTGATGGCTAATGCAATAAAGGAGAGATACTCAATAGCTTACTTCCTATGCCCCTCATATGATGCTTTCATAGGGAGTTGCAGCGAGCCTACTATTTACAGAAAATTCACTTTTGGAGAGTACAGACAACAAGTTCAAGAAGATGTCAAGAAAACTGGACACAAAGTAGGCCTTCCAAGGTTTCTGCTTCAGACCACACAATAG 1023 0.4673 MTNSNPPLLQHYGVLCQHGETPAVQQRDCGNNGAAMEECQLPLIDLEGLWSESEEERLACASAIGRASSKWGFFQVVNHGIRPELLSEMRREQVKLFETPFERKAACQLLDNSYRWGTPTATCPKELSWSEAFHIPLTKVSEEACYGEFCSLREVMQEFAKAMSNLARLLAGVLAESLGHQKGVFDEICDENTCFLRLNRYPPCPVSPEVFGLVPHTDSDFLTILYQDEVGGLQLMKDSKWVAVKPNKDTLIVNIGDLFQAWSNNEYKSVEHQVMANAIKERYSIAYFLCPSYDAFIGSCSEPTIYRKFTFGEYRQQVQEDVKKTGHKVGLPRFLLQTTQ* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1251 340 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 135 IPR026992 -
Vvi1g1251 340 Gene3D - 16 324 IPR027443 -
Vvi1g1251 340 FunFam Gibberellin 2-beta-dioxygenase 8 39 328 - -
Vvi1g1251 340 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 291 IPR005123 -
Vvi1g1251 340 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 41 317 - -
Vvi1g1251 340 Pfam 2OG-Fe(II) oxygenase superfamily 196 291 IPR044861 -
Vvi1g1251 340 SUPERFAMILY Clavaminate synthase-like 34 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1251 Vvi-Chr1 17965019 17966459 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1251 24 316 Glycosyltransferase AT5G59530 29.808 2.31e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1251 - - vvi:100854674 706.442