Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1240 ATGATTTTTGCTTCTTGTCACTTCGTTCTCTCCCATTTGCCCAATTTCAATTCCATCACCGGTGTCTCATTTGCTGCCGCAACCATGTCCTTAACTTACTCAACTATTGCCTGGACAGCTTCGGTTCATAAGGGTGTCCAACCGGATGTGCAATATACATACACAGCTTCCACAACAACTGGAAGAGTCTTCAACTTCTTTAGCGCCTTGGGGGATGTAGCATTTGCCTATGCTGGTCACAATGTGGTGTTGGAGATCCAAGCAACAATTCCTTCCACACCTGAGAAGCCTTCCAAGGGACCGATGTGGAAAGGAGTGATTTTTGCGTATATTGTTGTTGCCTTGTGCTACTTCCCTGTTGCTCTGATTGGATACAGGATGTTTGGGAACAGCGTTGCTGACAGTATCCTTATCACACTGGAGAAACCCCGTTGGCTTATAGTAGCAGCCGACCTGTTTGTTGTCATCCATGTTATTGGAAGCCACCAGATATATGCTATGCCAGTGTTTGACATGCTAGAAACATTATTGGTGAAGAAACTCCATTTCACACCTTGTTTCAGGCTTCGTCTTATTACACGCACTCTATATGTTGCTTTTACGATGTTCATTGCTATGCTGATCCCTTTCTTTGGTAGTCTCCTCGGATTCTTGGGAGGATTGGTTTTTGCCCCAACAACATACTTTAGAAAAATTATATTTCTCATTCATATTTTAAAAGTATGCAGCCCTAGAAATACATATAGTAGCATAAAAGAAAGAATAAAAAGAGTTAGAAACTACCCTATTAAAGATCCCTAG 801 0.4195 MIFASCHFVLSHLPNFNSITGVSFAAATMSLTYSTIAWTASVHKGVQPDVQYTYTASTTTGRVFNFFSALGDVAFAYAGHNVVLEIQATIPSTPEKPSKGPMWKGVIFAYIVVALCYFPVALIGYRMFGNSVADSILITLEKPRWLIVAADLFVVIHVIGSHQIYAMPVFDMLETLLVKKLHFTPCFRLRLITRTLYVAFTMFIAMLIPFFGSLLGFLGGLVFAPTTYFRKIIFLIHILKVCSPRNTYSSIKERIKRVRNYPIKDP* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1240 266 Pfam Transmembrane amino acid transporter protein 1 229 IPR013057 -
Vvi1g1240 266 PANTHER OS05G0424000 PROTEIN-RELATED 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1240 Vvi-Chr1 17750966 17754519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1240 1 240 Organic Solute Cotransporters AT5G40780 73.750 2.69e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1240 - - vvi:100247632 428.713