Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1237 ATGACAGAAAAGCCGCCATTAAAATACCTCTCACCCCAAGATTGGGAGCTCCTCATTGAAGACTTCCAATACGACGTCGTACGCCGCGAGAAATGGACATCCCACTACTCCCCACTCTCCATCCTCGACCTCGCCCTCTCCTCCATTCTCCGCAAGGACTTCCCCCTCAAGCTCTCTCTCATCTCCTTCCTCGAAGAGTTCTCCGATTCTCTCTTCCGCAATTTCGAAGTCCAACTCGCCCTCGACCGCCTCATCGATGCCGTCAGATCGGTGGTTCAAGCTCCTCATGATGCTGTCTCCTTCTCCTCCGCGCTCAAGGAGCGAATGGTGGTTGCGGTCACCTCCATTTTGATATGCATTGGAAATGATGTCGAAGTTTGCCTAGGCCAACTGGAGAGCTTGGTGGAGTTGCTTTTGACAATTGTGAATCGGCCGAGTCATGGGGCGGATCGGCAGATGAGGGCGGTGGCCTGCGAGTGCTTGCGGGAGTTGGAGAGGGCGTTCCCGTGCTTGCTGGCAGAGATCGCGGGGCATATTTGGGGATTGTGCCAGAGCGAGCGAACTCACGCTTCGCAGAGCTACATTCTGTTGTTCACATTGGTGATACATAATATTGTGACTAGGAAGGTGAATGTATCGATTTTAAATACATCGGTGCCTTTGGTGCCCTTCAATGTGCCCCAATTTGTGGTTGGAGGTTCGAGCAGGGAGGTTTCGGGGTTGAATTTTAAGGAGCTGAGGAGAGTGATGGCGTTTTTGTTGGAATCGCCGCAGATTTTGACTCCTAGCGCGATGATGGAGTTTATGTCGTTGGTGATGCCGGTGGCGTTGGTGTTGGAGTTGCAGGCATCGATGTTGAAGGTGCAGTTCTCTGGCCTGCTTTACTCCTATGATCCCATGCTATGCCATGTTGTTCTGATGATTTATTCGCGTTTCGTAGATGCGTTTGATGGGCAAGAGGCCAGCATCGCTCGCCGGCTTGTGTTGATCTCGAGGGAGGCCCAGCTCCCTCTTGTTTTTCGCTTGCTTGCCCTCCATTGGTTGTTGGGTTTCATTGGATTGGTACCGGATAGCGGCGGGAGGAAGAAACAGTCAATTGTTGAAATAGGTTTGGGATTTTTTTACCCGTCCGTCTTTGATCCGCTTGCACTGAAGTCATTGAAGCTTGACCTTCTTGCCTCCTGTGCCATATGTCTCAACACATTGAGTGCGGATAATATGGGAGGAGGGTCAAGTGAGGTGGCAGGGCCCCGAGTATCTGTGGTGAAGCTATTTGAGGATGGCCTTGTCTCTGTATCCGCGTTCAAGTGGTTGCCTCCATGGAGCACAGAAACTGCAGTGGCATTCCGCACCTTTCACAAATTCCTGATAGGTGCCCGGTCTCATTCTGATACTGATTCTTCCACCAATAGAACCCTGATGGAGTCTACCATCTTCCACACTCTAGAGAGGCTGCTTGTGGAGATGACATTGGAGTTTCAGAGATTGGTTCCAGTAATTGTTGCTTTTGTTGACCGTTTGTTGCTCTGTCACAAGCATCGTTGGTTGGGAGAACGCTTGCTTCAGACATTTGATCAGCATTTGCTTCCAAAAGCCACCATAGACTATAGATTGGCTTCTTATTTCCCAATTTTTGATAGAATTGCTGAGAATGATACCGTTCCCGCTTGTGGATTGTTGGAGCTGCTTACCAAATTTATTGTTTCCCTTGTTGAAAAACATGGCCCAGATACGGGATTGAAATCTTGGTCTCTGGGAAGTAAAGTTCTTGGCATTTGCCGGACGTTGATGATACACCACCATAGTTCTAGATTATTCCTTGGATTATCTCGTCTCCTTGCATTCACTTGCCTGTATTTTCCTGATTTAGAGGTTCGGGACAATGCAAGGATCTACCTGCGGATGCTGATCTGTATACCAGGAAAGAAGCTTAGACACATATTGAACCTCAGGGCACAACTCCCTGGAATTGCGCCATCTCCACATACCAGCTCATTCTTCAATGTTCAGTCTCCTCGGCCTTCTCGTGATCTTAAGAAATCCAGGAATATCTCTTCTTACATTCACCTTGAGCGTGTTATACCACTGCTTGTAAAACAATCTTGGTCCTTGTCTTTGCCAACTTTGGGTATTGGGGGTGACAAACCTGGTTATCTGGAGAATATCATGGACAGTGAACCCCCAGTTGACATGGAAAGGGAGGTTGATGGCAGTAGTAGTATACAAATCATCTCTGAGACTGAAAAAATTGATCATCCACAGGAGCCTTTACGTGTGATGGATTCAAAGATTTCAGAGATCCTAGGAATATTGAGGCGGCATTTTTCATGTATTCCGGATTTCAGACACATGCCAGGGCTTAAGATTAGAATATCCTGTAGTTTGAGATTTAAATCTGAGCCCTTCAATCGTGTATGGGGGGCTGATGTGCCTGCTGCTGATTTGGATGGTGTAGATGCACTTCCTGCCATATATGCAACTGTGCTCACGTTTTCATCTTCGGCACCTTATGGGTCTATCCCATCATTTCACATACCCTTTTTACTTGGTGAACCTCCCACAAATGGTTATTCCTCAGGTCAAAAGGGCTCATTGGATATTGTCCCTGTTGAAAATGGTTCAGAAGAGGAAGAAAGTTTCAGGGCTCCTGTAATGATTGAATTGGAACCACGGGAACCAATGCCTGGTCTTGTTGATGTTTCCATTGAAACAAATGCAGAAAATGGTCAGATCATAAGTGGACAGCTTCAGAGTATCACAGTGGGCATTGAAGACATGTTTCTCAAGGCCCTTATCCCAGCCGACATTGCAGAAGATGGAGTTCCTGGTTATTACTCAGAAGTGTTCCATGCTCTGTGGGAGGCATGTTGTACTTCATCCAACACTGGGAGGGAGACCTTCCCTTTGAAAGGAGGCAAAGGAGTGACAGCAATCAATGGGACCCGATCTGTTAAGCTCCTTGAAGTTCCTGCAATGTCTTTGATCCGGGCAGTTGAGCGCCACTTGGCACCCTTTGTTGTAAGTGTGATGGGTGAACCCCTTGTTAACATTGTAAAGGATGGGGGAGCGATCAGAGACATCATCTGGAAGGATGGAGCCTCAGATTCAGCCCTAGATGTTTCCACCTCAGTTACTGATTACGCGGAGGAGCCACTCCAACTCAAGTACATTGATGAAGAAGATGACAGAGAGAGCAATGTGAACATCAGCAACAGAAACATTGGGTGCTTTCTGGTCTTGATATTTCTTCCACCAAGGTTCCATCTCCTTTTTCAAATGGAGGTATGTGAGCTCTCAACTTTAGTTCGGATTAGAACTGATCACTGGCCATGCCTAGCTTATATTGATGATTATTTGGAAGCTTTGTTTTTATCATAG 3378 0.4725 MTEKPPLKYLSPQDWELLIEDFQYDVVRREKWTSHYSPLSILDLALSSILRKDFPLKLSLISFLEEFSDSLFRNFEVQLALDRLIDAVRSVVQAPHDAVSFSSALKERMVVAVTSILICIGNDVEVCLGQLESLVELLLTIVNRPSHGADRQMRAVACECLRELERAFPCLLAEIAGHIWGLCQSERTHASQSYILLFTLVIHNIVTRKVNVSILNTSVPLVPFNVPQFVVGGSSREVSGLNFKELRRVMAFLLESPQILTPSAMMEFMSLVMPVALVLELQASMLKVQFSGLLYSYDPMLCHVVLMIYSRFVDAFDGQEASIARRLVLISREAQLPLVFRLLALHWLLGFIGLVPDSGGRKKQSIVEIGLGFFYPSVFDPLALKSLKLDLLASCAICLNTLSADNMGGGSSEVAGPRVSVVKLFEDGLVSVSAFKWLPPWSTETAVAFRTFHKFLIGARSHSDTDSSTNRTLMESTIFHTLERLLVEMTLEFQRLVPVIVAFVDRLLLCHKHRWLGERLLQTFDQHLLPKATIDYRLASYFPIFDRIAENDTVPACGLLELLTKFIVSLVEKHGPDTGLKSWSLGSKVLGICRTLMIHHHSSRLFLGLSRLLAFTCLYFPDLEVRDNARIYLRMLICIPGKKLRHILNLRAQLPGIAPSPHTSSFFNVQSPRPSRDLKKSRNISSYIHLERVIPLLVKQSWSLSLPTLGIGGDKPGYLENIMDSEPPVDMEREVDGSSSIQIISETEKIDHPQEPLRVMDSKISEILGILRRHFSCIPDFRHMPGLKIRISCSLRFKSEPFNRVWGADVPAADLDGVDALPAIYATVLTFSSSAPYGSIPSFHIPFLLGEPPTNGYSSGQKGSLDIVPVENGSEEEESFRAPVMIELEPREPMPGLVDVSIETNAENGQIISGQLQSITVGIEDMFLKALIPADIAEDGVPGYYSEVFHALWEACCTSSNTGRETFPLKGGKGVTAINGTRSVKLLEVPAMSLIRAVERHLAPFVVSVMGEPLVNIVKDGGAIRDIIWKDGASDSALDVSTSVTDYAEEPLQLKYIDEEDDRESNVNISNRNIGCFLVLIFLPPRFHLLFQMEVCELSTLVRIRTDHWPCLAYIDDYLEALFLS* 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1237 1125 PANTHER AP-5 COMPLEX SUBUNIT BETA-1 5 1122 IPR038741 GO:0016197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1237 K19022 - vvi:100249600 2189.46