Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1202 ATGTATGCAACTCACTGGATCCAATCGTATGATGATAACAAAACAGCGATAATCAGACACGAATGTCCTGGATCCACCTGCGTTGTTTGTTCCCCTAGATTTCTTCGTTTTTTCTCGAGAAAATCTCAAATGGGTTTGCTTGAATCCGCCGCTTCCATTAACTGGGAGCATGAATCCTTCCCAGAATATGGAGATTTCGTTGCTCTTCCCGTCTTTGCTTTTTTCTTCTTCTCTGTTCGCTTCTTTCTCGATAGATTTGTCTTCCAGAAATTGGGAAGAATACTGATTTTTGGAAAGGGTGGTCAGCAGCTAGATGTTGGGGTAGATGAGAAGAGAAAGAAATTACGAAAGTTCAAGGAATCAGCATGGAAGTGTGTTTATTTTCTTTCAGCAGAGCTTCTAGCTCTATCTGTAACTTATGATGAGCCTTGGTTTACTAACACAAAATATTTTTGGGTAGGGCCTGGTAATCAAGTCTGGCCTGACCAACAGATTAAGTTGAAATTGAAGGGTTTGTATATGTATTGTGGTGGATTCTACACATACTCCATATTTGCTTTGATTTTTTGGGAAACAAGGCGGTCTGATTTTGGAGTGTCAATGGGTCATCATGTGGCAACTTTTATTCTCATTGTGCTGTCTTACATATTCAGATTCGCCCGTGTTGGTTCTGTTGTTTTAGCTCTTCATGATGCTAGTGATGTCTTTCTGGAGGTAGGGAAGATGTCCAAATACAAAGGTGCTGAAACCACTGCAAGCATCTCTTTCATTCTTTTTGTTTTGTCTTGGATCGTACTTCGCCTAATTTACTATCCATTCTGGATCCTTCGGAGCACAAGCTATGAAGTTATCCTGACCTTGGACAAGGAAAAGCATGCAGTGGAAGGACCAATTTATTATTATTTGTTCAATACTCTTCTATTCTGCTTGCTTGTTCTTCACATTTATTGGTGGGTGTTGATGTATCGGATGCTTGTTAAACAAGTCCAAGCAAGAGGCCAACTTAGTGATGATGTTAGATCTGACTCTGAAGATGAAGATGAACATGAAGATTGA 1056 0.3996 MYATHWIQSYDDNKTAIIRHECPGSTCVVCSPRFLRFFSRKSQMGLLESAASINWEHESFPEYGDFVALPVFAFFFFSVRFFLDRFVFQKLGRILIFGKGGQQLDVGVDEKRKKLRKFKESAWKCVYFLSAELLALSVTYDEPWFTNTKYFWVGPGNQVWPDQQIKLKLKGLYMYCGGFYTYSIFALIFWETRRSDFGVSMGHHVATFILIVLSYIFRFARVGSVVLALHDASDVFLEVGKMSKYKGAETTASISFILFVLSWIVLRLIYYPFWILRSTSYEVILTLDKEKHAVEGPIYYYLFNTLLFCLLVLHIYWWVLMYRMLVKQVQARGQLSDDVRSDSEDEDEHED* 352
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1202 351 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 110 349 IPR016439 GO:0046513|GO:0050291
Vvi1g1202 351 SMART lag1_27 116 330 IPR006634 GO:0016020
Vvi1g1202 351 ProSiteProfiles TLC domain profile. 116 330 IPR006634 GO:0016020
Vvi1g1202 351 Pfam TLC domain 117 323 IPR006634 GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi1g1202 Vvi-Chr1 16692430 16716319 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1202 - - vvi:100251278 558.14