Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1197 ATGACGAACAATCAAACATACTATGTAGTGTTTGTCGATCGTAGACATGGAGTGTACGATTCATGGGTTGAATGTCAAAAGAATGTCCTACTTTATAAGAGGAGTGTTTACAAATCATATACTTCTAGAGAGGAAGCTGTCCGAGCTTGGGTGTTCTATGCACCAAGATGGAAGGGAAGTGATGAAACAACTAGCAAACCAAAGTTTGAACTTCCAGATGATGATCAGCATTCCTTCCAAATTATTTCATATCCATATGTAATCACTTTCTTTGTTGGCTTCTTTGTAGTATGTGTTTTGCATATTGTAATATCTAGCTTAACATAG 327 0.3639 MTNNQTYYVVFVDRRHGVYDSWVECQKNVLLYKRSVYKSYTSREEAVRAWVFYAPRWKGSDETTSKPKFELPDDDQHSFQIISYPYVITFFVGFFVVCVLHIVISSLT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1197 108 Gene3D - 4 52 IPR037056 -
Vvi1g1197 108 Pfam Caulimovirus viroplasmin 7 47 IPR011320 -
Vvi1g1197 108 SUPERFAMILY L9 N-domain-like 6 48 IPR009027 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1197 Vvi-Chr1 16613785 16614111 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1197 - K03469 vvi:100854265 140.198