Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1187 ATGGGATTCATGTTCTTAGTCACGTCTGCCCTACTTGGTTATATATATTCTCCTCGTTTGGATTCAGCTCCACCAAGATGGGTGCACTTTGCTCATGGTTTACTTCTTTTCTTATACCAGACTTTTGATGCTGTTGATGGGAAGCAAGCAAGGCGGACAAATTCCTCTAGTCCATTGGGAGAACTTTTTGACCATGGATGTGATGCCCTTGCATGTGCGTTTGAAACCATGGCTTTTGGGAGCACTGCTATGTGTGGAAGAACTTCTTTCTGGTTCTGGGTAATTTCAGCTGTTCCATTTTATTGTGCAACATGGGAACACTTTTTCACCAATACCCTTATTCTTCCAGCAATAAATGGACCTACAGAGGGGCTCATGCTGATATACTTTTGCCATTTTTTTACAGCTATAGTTGGTGCTCAATGGTGGGTTCAAGAATTTGGAAAGTCTATGCCCTTTTTAAGTTGGCTGCCATTTGTATATGAAATCCCAACATACAGAGTTGTGTTGTTTATAATGATTGCTTTTGGTGTGATACCAACAGTCTCATTCAATGTATACAATGTTTATAAGGTTGTTCAGGCAAGAAAAGGAAGCATGCTGCTGGCATTAGCTATGCTTTATCCTTTTGCTGTGCTCATGGGAGGAGTCCTGGCATGGGATTACTTATCTCCATCTGATATAATGGGGAACTATCCACATTTGGTTATAGTGGGAACTGGACTTGCATTTGGATTCCTTGTGGGAAGGATGATTCTGGCACACTTGTGTGATGAACCCAAGGGCTTGAAAACTGGAATGTGCATGTCACTGTTGTATCTCCCTTTTGCCATTGCAAATGCACTCACGGCTAGACTGAATGATGGAGTTCCTTTGGTTGATGAGAGTTTGGTACTTCTTGGTTATTGTGTCTTTACAGTGGGACTCTATTTGCACTTCGCAACATCAGTTGTACATGAAATCACATCAGCCCTGGGAATCTATTGCTTCAGGATAACTAGGAAAGAAGCTTGA 1014 0.4181 MGFMFLVTSALLGYIYSPRLDSAPPRWVHFAHGLLLFLYQTFDAVDGKQARRTNSSSPLGELFDHGCDALACAFETMAFGSTAMCGRTSFWFWVISAVPFYCATWEHFFTNTLILPAINGPTEGLMLIYFCHFFTAIVGAQWWVQEFGKSMPFLSWLPFVYEIPTYRVVLFIMIAFGVIPTVSFNVYNVYKVVQARKGSMLLALAMLYPFAVLMGGVLAWDYLSPSDIMGNYPHLVIVGTGLAFGFLVGRMILAHLCDEPKGLKTGMCMSLLYLPFAIANALTARLNDGVPLVDESLVLLGYCVFTVGLYLHFATSVVHEITSALGIYCFRITRKEA* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1187 337 Gene3D - 1 197 IPR043130 -
Vvi1g1187 337 PANTHER ETHANOLAMINEPHOSPHOTRANSFERASE 1 335 IPR014472 -
Vvi1g1187 337 PIRSF CHOPT 1 337 IPR014472 -
Vvi1g1187 337 FunFam Choline/ethanolaminephosphotransferase 1 1 196 - -
Vvi1g1187 337 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 46 68 IPR000462 GO:0008654|GO:0016020|GO:0016780
Vvi1g1187 337 Pfam CDP-alcohol phosphatidyltransferase 30 186 IPR000462 GO:0008654|GO:0016020|GO:0016780
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1187 1 337 Miscellaneous Gene Families AT1G13560 83.383 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1187 K00993 - vvi:100259768 697.582