Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1186 ATGGCAAGAGCAAAAGCTGGGGACTTGATATCATTGAGAAACATCAACCCACTTCACACTACATACCAAGCAGCACCAACGGCTAAGCCCCCTAGCAGCTTCCTCAACATCAGAGCTTCTTCGAAGAAGGCAAATGGTTTCTCACTGATTGCCAAAAAGAGCAGCAGGAGCCCCAAGCGTCTGATAACAATCTCAACATCAGACGGGAGATGGCATGGCAAATGGAATTCTGACTACGTCTTCTCCTTCCGGGAGCTGCAGTTGGAAGATTTGGTTGAAGAAGATGAAGAAAAGGATGCTGAGGTCTCTATAAGCCTCTGCATTCACAAGCATGCGAGCTTCGGCTTTTCTGTGGACGGCAGGATCATCACATCTTTCACCAGAAAATGCAGCAATTGCTCCTCCCCATATTGCAAAGAGGTTGACACAAACTTTACTGTGTGGGTTCTGCCCACAAGCAGAGAAAACTGTGGACTAGCTGAAATTGGGGGCGATGATCCATCATTAAGTGATCTATGTGAAACCCGGATGCGAAGCTAA 540 0.4722 MARAKAGDLISLRNINPLHTTYQAAPTAKPPSSFLNIRASSKKANGFSLIAKKSSRSPKRLITISTSDGRWHGKWNSDYVFSFRELQLEDLVEEDEEKDAEVSISLCIHKHASFGFSVDGRIITSFTRKCSNCSSPYCKEVDTNFTVWVLPTSRENCGLAEIGGDDPSLSDLCETRMRS* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1186 179 PANTHER LARGE RIBOSOMAL RNA SUBUNIT ACCUMULATION PROTEIN YCED HOMOLOG 2, CHLOROPLASTIC 4 169 IPR044985 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1186 - - vvi:100253004 325.094