Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1183 ATGCTCATTTCATTTAGCCTACTTGGAAAATATTTGGAGGTTTTGGCCAAGGTTTGGAACGTAAAGAAATCCGTTCACTTGGTCCAAGGAACATTGCATCCAGATGTGATTAAACCTTGCCCACTACCTGGAAGTGGAAGAACTCACTCCCACGCAATCAAGAGCCATCATAATGTTGGAGGGCTTCCTAAGGACATGAAATTGAAGCTTATTGAACCACTTAAACTTCTATTTATGGATGAGGTTCGTGAACTATGGAGGATCTTGAATGTTCCTCAGGCATTTCTACAACGCCATCCATTCCCTAGGCCTGGTCTTGTAGAGCGAGTTTTGGGGGACGTTACAGAAAAAATTCCTTGGATATTCAATGCCAGGTTGATGAGATTTTCATCCAATCAACCAAAGATGTTGGAAAATGGGAGTTTTTGGGCTTTAAGGTGA 441 0.4195 MLISFSLLGKYLEVLAKVWNVKKSVHLVQGTLHPDVIKPCPLPGSGRTHSHAIKSHHNVGGLPKDMKLKLIEPLKLLFMDEVRELWRILNVPQAFLQRHPFPRPGLVERVLGDVTEKIPWIFNARLMRFSSNQPKMLENGSFWALR* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1183 146 ProSiteProfiles GMP synthetase ATP pyrophosphatase (GMPS ATP-PPase) domain profile. 1 98 IPR025777 GO:0003921|GO:0005524
Vvi1g1183 146 Gene3D HUPs 7 107 IPR014729 -
Vvi1g1183 146 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 27 118 - -
Vvi1g1183 146 PANTHER GMP SYNTHASE-RELATED 20 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1183 Vvi-Chr1 16288424 16288864 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1183 K01951 - vvi:100246139 169.474