Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1177 ATGGCAATACGTGATGCAGATATGTATGCGCGAAATTCGGCTGACTGTACTCATAGGATTGGAGATACAGTTTTGAGCTTAGGACTACCATTTCACTGGATACGGGTGTCTGGAAACAGGGGAGCCAGTGGTATTGATGGTTTGCTGAGTACTGCTATTGGTTTTGCTGTGGGATGCAATAAACGATGTGGTGACTGGCAAGAGGGTGGCTATGACAAGTTCAAGGCTGGTGGTGGCTTTCATGAGCGGCTACAAGGGTTTTTTATGAACAAGATGAGTTTTTTCCTTCTTTTCAAGATGGTGATGATTTTCGACTTCCACAAAGGAGGAATATTCAACAAAGGCAGCAATGGAGGTTGGATTATTCATCAAGAGAAGAAAATGATTTCTATTTCAACTATCGGGCTAACAATCGGGGTCAAAATAACCAAGAATTTAAGATGA 444 0.4212 MAIRDADMYARNSADCTHRIGDTVLSLGLPFHWIRVSGNRGASGIDGLLSTAIGFAVGCNKRCGDWQEGGYDKFKAGGGFHERLQGFFMNKMSFFLLFKMVMIFDFHKGGIFNKGSNGGWIIHQEKKMISISTIGLTIGVKITKNLR* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1177 147 PANTHER 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE SYNTHASE 1 62 - -
Vvi1g1177 147 Gene3D - 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1177 Vvi-Chr1 16211717 16214403 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1177 K14759 - vvi:100241089 130.568