Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1175 ATGGCCATCCTAAATGCTATAGCTGCACAGGAAGGCTCAAGTTTATTAAACATTCTGCATCCCTATAAAGTTGAAGAAGAAATATCTGAAAGGTCAAAAAGAGTTCAGATTTGTGCCCTTCTTGATTCTAATGGGTCTCCCTTGGAGGTTGCTTATCTTGCCAAGACACTTGTTGAAGAAGGTTTTACTGCTATAAAGCTAAAAGTAGCACGTCGGGCAGATCCAATTGAAGATGCTACAGTCATACAAGAAATAAGAAAGATGGTTGGACTACAGATCGAGCTTCGTGCTGATGCCAACCGAAACTGGACTTATGAACAAGCAATTCAGTTTAGCTCTTATGTTAAAAATTGTGATCTGAAGTACATTGAGGAACCTGTCAAGGATGAAGATGATATTATTAAGTTCTGTGAAGAAACTGGCTTACCAGTAGCATTGGATGAAACCATGGACAAAATTGGAGAAACTCCTCTTCAAAAGCTTGCAAAGTTCTCACACTCAGGAATAGTTGCTGTTGTTATCAAACCAAGTGTTGTTGGTGGTTTTGAAAATGCTGCATTGATTGCTCGATGGGCCCAGCAACAGGGTAAGATGGCTGTTGTCAGTGCAGCATTTGAAAGTGGGCTTAGTTTGTCAGCATATATTCAGTTGTCTAGTTATTTTGAGCTGCAAAGTGCAGAGATATGCAAATTGATGAATAAGCAACTGGTTCCATCTGTAGCCCATGGTCTTGGAACCTACCGATGGCTTAAAGAAGATGTAACTTTTGAACCTCTCAGCATTAATCGTAGTCAGGACAGTGGCTTTATAGAAGCATCTGTTGTTGATGCTGATCGAATCCTGCAGAAATTTCAGATCAACCGAGATACTATCATAAGAATTTTTTCTGAGGAACAAGTTTACACTCATCAGTTGGCTGTGGATTCAGATGGCTTCTCGTGCTTGTTGAATGTTCATGAGATTGGAGCAAGCATTGAGAATGATGTAGTTGTATTTCTTCATGGGTTCCTTGGAACTGGTGGAGACTGGATTGCCACTATGAAAGCCATCTCAGGATCTGCTAGATGCATTTCAATCGACCTTCCAGGCCATGGGGGGTCAAAGATACAAAATCATGATGGAAAAGAGGATGTGCTAGAACCAAATTTGTCGATTGAGGTAGTTGCAGATGTATTATATAAGTTGATTCATTCTATTACTCCTGGAAAAGTTACCCTTGTGGGTTATTCAATGGGTGCAAGGATTGCTTTGTACATGGCTCTGACTTCAAGCTTTAGTGATAAGATCAAAGGCGCTGTTATTATATCTGGAAGCCCTGGACTAAAGAATGATGAAGCCAGAAAAATTCGCATGGTTAAAGATGATTCCAGATCACATGCCCTCATCACTCATGGCTTACAAATCTTTCTAGAAAGCTGGTACTCTGGAGAGCTGTGGAAGAGCTTAAGAGGTCATCCCCAGTTTAATCAAATAGTTGCCAGCCGTCTGCAGCATAAAGATGTACGGAGTCTAGCCAAAACTCTCTCTGATTTGAGCATTGGGAGGCAGCGGCCATTATGGGAGGACTTGAGGCAATGCAGTACACCTCTTTTGCTCATTGTTGGAGAGAAGGATGGGAAGTTCAAGAGGATTGCTCAGGAAATGTGCTATGAAATTGGTCATGGTACGAGTAATGGAGATGACTCCAGGAAAGAGATTTATGAAATAGTTGAGGTTCCCAACTGTGGGCATGCTGCCCACCTAGAGAATCCTCTCCCTATAATCCGTGCACTGAGAAGATTTTTGACAGGACTAGAAAACAGTTCAACACCAAATGAAAGAGCTGTTCCCTTTCATGGGTCATGA 1845 0.4157 MAILNAIAAQEGSSLLNILHPYKVEEEISERSKRVQICALLDSNGSPLEVAYLAKTLVEEGFTAIKLKVARRADPIEDATVIQEIRKMVGLQIELRADANRNWTYEQAIQFSSYVKNCDLKYIEEPVKDEDDIIKFCEETGLPVALDETMDKIGETPLQKLAKFSHSGIVAVVIKPSVVGGFENAALIARWAQQQGKMAVVSAAFESGLSLSAYIQLSSYFELQSAEICKLMNKQLVPSVAHGLGTYRWLKEDVTFEPLSINRSQDSGFIEASVVDADRILQKFQINRDTIIRIFSEEQVYTHQLAVDSDGFSCLLNVHEIGASIENDVVVFLHGFLGTGGDWIATMKAISGSARCISIDLPGHGGSKIQNHDGKEDVLEPNLSIEVVADVLYKLIHSITPGKVTLVGYSMGARIALYMALTSSFSDKIKGAVIISGSPGLKNDEARKIRMVKDDSRSHALITHGLQIFLESWYSGELWKSLRGHPQFNQIVASRLQHKDVRSLAKTLSDLSIGRQRPLWEDLRQCSTPLLLIVGEKDGKFKRIAQEMCYEIGHGTSNGDDSRKEIYEIVEVPNCGHAAHLENPLPIIRALRRFLTGLENSSTPNERAVPFHGS* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1175 614 SUPERFAMILY alpha/beta-Hydrolases 326 597 IPR029058 -
Vvi1g1175 614 Pfam Enolase C-terminal domain-like 54 221 IPR029065 -
Vvi1g1175 614 Gene3D - 22 267 IPR036849 -
Vvi1g1175 614 PANTHER 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1-CARBOXYLATE SYNTHASE 1 598 - -
Vvi1g1175 614 ProSitePatterns Mandelate racemase / muconate lactonizing enzyme family signature 2. 95 126 IPR018110 GO:0009063
Vvi1g1175 614 SFLD o-succinylbenzoate synthase 15 265 - -
Vvi1g1175 614 Pfam alpha/beta hydrolase fold 329 584 IPR000073 -
Vvi1g1175 614 SFLD Enolase 15 265 - -
Vvi1g1175 614 SMART MR_MLE_2 47 143 IPR013342 -
Vvi1g1175 614 SUPERFAMILY Enolase C-terminal domain-like 41 263 IPR036849 -
Vvi1g1175 614 Gene3D alpha/beta hydrolase 322 596 IPR029058 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1175 K14759 - vvi:100241089 1210.28