Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1169 ATGACAACCGGGTCGCGCAGTGCCTGCAACTCCAACCATCCAATAATTCGATTTGGTCAGTGCGCTTTGCTAACGTACTCCGGAGCTCGTCTTCTTCTTCTTCGCTGTTTGGCTTCTCGGAAAATTCTCCTCAAGGTAGCTGAAGAGAAGAACGAAGGCATGGGAATGGATAACAATGTTGTTGATGATACTGATATGAATGGAAAGGGCATGGAAGAACTAGAGTGTGCTGTTAAAGTTTTACTAAGCTTAGATTTGGACCTGGCCTATTCTTCTGAGAAGTTGGTAAATTTGCACGTGCTTTTAATGCAAGTTTGGGCTCGGGAAAATGTTTTTGAAGCAATGGCAATGGAAAAAGACCATATCTCAGCAGACTCCATTGAGAAGGCATTGGTATTTGATCTCTTATCTGGTATTTTAGATTCAGAGGTAAGAGAGATAGAAAATTTCATGGATACTCTCCAAGCAGAGATTGTTGATGCCCATAAAAAAATATATTCGTGCAGTCACTTGAGAGAATTATTCAATGTAATGGAAGAGAAGTTGATTGATTGTGAAGAATCTTTGAAGCAGTCCCAAGAGCAGGTTCTGAAGATGAACACACAGTTAGCCAAGTTTCAGAGGGTCTTTTTAGAATTTGAATATCAAAATGGGAAAAATGACGAGAATATTGATTCAAGAGAGAATGGTCAACTTTCAAACATAAATTTGAAGTTGAAAATGCCAGCAGTCAGACAACAAAGACATATTCTAAGGGTCCTAGATAAATCTCTTGAACGAGAGCTTGATCTTGAGAAGAAGTTATTGGAGATAAGACAGAGTGAAGAAGAGCTGAAACTAAAAATGCACTTAACTGAGCAGGTAGGTTTCTGCATGGAAGAAGCAGCAGGGGCTATTTATGGAAGGTTTTTAGAGGCAGAAAATTTAGCTGAAGTGCTAATGGGGATTTCAAAGGAGTTAGTAGGTCGGCTTCAGATTGCTCAATTCAACCTGAATGGCTCAATCCAACGAGAAGCTGAGGCTAAATATAAACTTCTTGATTGCATGGAACAACTGAAAGCCAAAGAAACTGCTTCACAAAGGCTTGAGAAGATCAATTCTGAACCTTTCAATTTTGATGAATCTGAAGTGTTTACTTTGAGAGAAAAGATTCAATTGCTCGAAGAACAGCTGAAAGAATCTGAGTTACAACTGAAGAATGCGCATGCATCCAATGAAGCTATGCAAGAACAATTGAGTGGAATGGACAATCTAATTGAATCTCTAAAAGAAGGTATTCTTAAGGCAGAAAGCAAGGCTGAAAGTGCAGAAGGCAAGCTTACACTGTTAACGGAGACAAACCTGGAACTTACTGAAGAGATGGGTTTTCTTAAAGATAGTACAACCGAGAAAGCGGGCTCGCTTGAGAAGCAATTGAGGGACTTACAAATCCAACTGCAGCATGCCAAAGCCTCCTCTGAAGCTAGTCAAGAGCAGCAGAATATGTTATATTCTGCAATTTGGGATATGGAAACTTTAATTGAGGAACTGAAATCAAAAGTTTCAAAAGCTGAAAGTAAGACTGAGAATGCAGAAGAACAGTGTATCTTATTAACTGAAACTAACTTCGAACTTAACAAAGAACTCGGTTTCCTAAGGGATAAAATGGATTGCCTTGAGAAAACTCTGCATCAAGTTAAGTGTGAAAAAACAGCAAGTGCAGAAGACATTAGTATTAGGACTAGACTTATCATGGATATGGTCATGCAACTAGCCTTTGAAAGAGAGCGCATCCAGAAGCAGTTGTACTCTCTAACAGAAGATAATAGAATTTTGGTGGAGAAGATACAGAAAGCTAAAAACAATGCTTCTGTAATTATGTACGGCAATGGAGATGGTGAAGAGAAAGACTTTCTGTTTGTCAAGCATAATTCAGCTACTGCTACTCAGGCAAAAACATTCAAGGAAACAGTGACAGAGCCCTTGCAAAAATCCCAGGTGGATGAACCATCAAAAGATTCACCTGAACCTGAGACTGAAGTAGAGACTTCTGTATCTGCCAAAGATGCTGCAAATGTGGTCTCAGAACTTGGGGCAGTTAATGTGGTCGGGGAAAGACGGCTCGACCTAATCTACATTTTTGTAGCAGTTCTTGTCTTACTTATTCCAGTGGCAACCATATATTTGTTCAACAAGAAGCTCATCATGGACGATGCTTTTAACGGTTAA 2208 0.3949 MTTGSRSACNSNHPIIRFGQCALLTYSGARLLLLRCLASRKILLKVAEEKNEGMGMDNNVVDDTDMNGKGMEELECAVKVLLSLDLDLAYSSEKLVNLHVLLMQVWARENVFEAMAMEKDHISADSIEKALVFDLLSGILDSEVREIENFMDTLQAEIVDAHKKIYSCSHLRELFNVMEEKLIDCEESLKQSQEQVLKMNTQLAKFQRVFLEFEYQNGKNDENIDSRENGQLSNINLKLKMPAVRQQRHILRVLDKSLERELDLEKKLLEIRQSEEELKLKMHLTEQVGFCMEEAAGAIYGRFLEAENLAEVLMGISKELVGRLQIAQFNLNGSIQREAEAKYKLLDCMEQLKAKETASQRLEKINSEPFNFDESEVFTLREKIQLLEEQLKESELQLKNAHASNEAMQEQLSGMDNLIESLKEGILKAESKAESAEGKLTLLTETNLELTEEMGFLKDSTTEKAGSLEKQLRDLQIQLQHAKASSEASQEQQNMLYSAIWDMETLIEELKSKVSKAESKTENAEEQCILLTETNFELNKELGFLRDKMDCLEKTLHQVKCEKTASAEDISIRTRLIMDMVMQLAFERERIQKQLYSLTEDNRILVEKIQKAKNNASVIMYGNGDGEEKDFLFVKHNSATATQAKTFKETVTEPLQKSQVDEPSKDSPEPETEVETSVSAKDAANVVSELGAVNVVGERRLDLIYIFVAVLVLLIPVATIYLFNKKLIMDDAFNG* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1169 735 MobiDBLite consensus disorder prediction 652 678 - -
Vvi1g1169 735 Coils Coil 458 492 - -
Vvi1g1169 735 SUPERFAMILY Tropomyosin 374 559 - -
Vvi1g1169 735 Coils Coil 542 562 - -
Vvi1g1169 735 MobiDBLite consensus disorder prediction 659 676 - -
Vvi1g1169 735 Coils Coil 175 209 - -
Vvi1g1169 735 Coils Coil 500 527 - -
Vvi1g1169 735 PANTHER WPP DOMAIN-INTERACTING TAIL-ANCHORED PROTEIN 1 54 726 IPR039976 -
Vvi1g1169 735 Coils Coil 377 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1169 Vvi-Chr1 15925062 15931152 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1169 - - vvi:100254648 1239.94