Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1158 ATGTATTTTCTCCTTGTCTGTATATTTCAATGTTTCTTCGTACCCTTGGTGGCATCTCAAGGCCAGCTTGCCCCAGCTTTATTCATATTTGGTGACTCCTTCTTTGATAGTGGCAACAATAACAACCGCAAAACACTTGCGAAAGCAAATTATCCGCCTTATGGCATAGATTTCCCAAGTGGAGTCACGGGCAGATTCTCAAACGGCCTTATAATTACCGATTACTTCGCTCTCTCTCTTGGGTTGCAAATATCTCCTCCATTCTTGGAAACCGAAGAGAGTGTGATGAAAAACTTCTTAGAGGGTTTTAATTATGCATCCGCTTCAGCTGGAATCCTCCCTGAAACTGGAAGTGCTTTGGGAGGGAACTTATGCATGACGAAACAGGTCAAGTTGTTCAGAAAGACAGTTCGAGATTATATACCACTACACTTTACAAGTTCAAATGAGCTATCAAATCACTTGTCAAAGTCCATCTTTGCAATTCTTATAGGAGGCAATGACTATGCCAATAATTACCTCCAACCTCAACAATACAACAGTAGCAGCCTGTACAACCCCAAACAATTTGGGGAGCTCCTTGTAAAGGAGCTGGGAAACCATTTGAAGGAACTATACTATTTGGGTGCCAGGAAATTTGTAGTGTTTGAGATCGCCGCAATTGGTTGTTTTCCAGCTATACTGAACAAAGTTAAACCGAAAACTCGATGCGTGGAGGATACAAATAAGTTAGTGTCCATTTTCAACAAGAAGCTAGCAAATGAGCTTAATCTCCTAAGCACCATTCTTGAAGGTTCAACATTCACAAAGGCAGAATCATATAGATTAACCTACAACATGTTGAAGCATCCTGCTCGTTATGGACTGAATGAAACAAGAAATCCATGTTGCATGGTTGGAGACAATGGAACTGGACCATGCATCCCAAATAAAAGGCCTTGCCAAGACAGGGACTCCCATCTCTTTTGGGACTCATTTCACCCCACCCAAGCGGTACACAAGGCTATTGGAAGCCAATGTTTCAATGCTACTGGCCTTTGCACTCCCTTCAATATTCTCCAACTCACTCAAAAGTCCTGA 1080 0.4204 MYFLLVCIFQCFFVPLVASQGQLAPALFIFGDSFFDSGNNNNRKTLAKANYPPYGIDFPSGVTGRFSNGLIITDYFALSLGLQISPPFLETEESVMKNFLEGFNYASASAGILPETGSALGGNLCMTKQVKLFRKTVRDYIPLHFTSSNELSNHLSKSIFAILIGGNDYANNYLQPQQYNSSSLYNPKQFGELLVKELGNHLKELYYLGARKFVVFEIAAIGCFPAILNKVKPKTRCVEDTNKLVSIFNKKLANELNLLSTILEGSTFTKAESYRLTYNMLKHPARYGLNETRNPCCMVGDNGTGPCIPNKRPCQDRDSHLFWDSFHPTQAVHKAIGSQCFNATGLCTPFNILQLTQKS* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1158 359 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 6 355 - -
Vvi1g1158 359 Pfam GDSL-like Lipase/Acylhydrolase 27 338 IPR001087 GO:0016788
Vvi1g1158 359 Gene3D SGNH hydrolase 17 345 IPR036514 -
Vvi1g1158 359 CDD SGNH_plant_lipase_like 25 343 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1158 Vvi-Chr1 15722218 15723982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1158 15 352 Acyl Lipid Metabolism Gene Families AT4G10950 36.047 1.08e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1158 - - vvi:100251346 738.028