Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1154 ATGTCTAAAGGAAATGTGAGAAGACTTTTTCTGGAGAAGAATAGAAGCATTAAAGAACAAGAGAAGCCAAACCAAGGCTTCCTATCCAGAAACCTCAGGAAAATCTACCCTCTTAGCCTTCAGAAAAGCACTTCATCCCTGTCCTTATCATCATTATCGTTGTCTCTGTCACAGAACTCCAACGATTCTTCTCTTAAGGATTATATTACTCCACTGGATCGGCAGATTGCTCTATCCCTCCGCCTGATAGGACCACCTGAAAGAAGAGAAGTCCCAGTGGCTATTACTAACGTCCCGCAACAACCTAGTCCGGATGTTGGAGATGGGGAATTGAAGAGGTGCAACTGGATTACAAAGAATAGTGATAAAGTTTATGTACAATTCCACGATGAGTGCTGGGGGGTTCCAGTTTATGAAGACAATCAATTGTTTGAGCTGCTGGCCATGTCTGGTATGTTGATGGACTACAACTGGACTGAAATTCTAAAAAGAAAGGAACTACTGAGAGATGCATTTTCCGGGTTCGATCCTAACACCGTTGCCCAAATGGGGGAGAAAGAGATCACGGAGACAGCCTCCAACAAAGCACTCATGTTAGCGGAGAGCAGAGTGAGGTGCATAGTAGACAATGCAAAATGCATACAAAAGATTGTAAGGCAATTCGGATCATTCAGCAGCTATATCTGGGGCTATGTGAATCACAAACCGATGATCATCAGATGCCGATACCCGAGAAGTGTGCCTCTAAGGACCCCAAAATCAGAAGCCATCAGCAGAGACTTAATCAAGCGAGGATTCAGGCTAGTGGGGCCGGTGATTGTTTACTCATTCATGCAAGCTGCAGGGATGACCAACGATCATCTTATTGACTGTTTTAGATATAGGGAATGTTTAAACCTTGCACACAGACCATACATGGACGCAATACCTGACATAAACATCAACGTCTTGTACTAA 957 0.4378 MSKGNVRRLFLEKNRSIKEQEKPNQGFLSRNLRKIYPLSLQKSTSSLSLSSLSLSLSQNSNDSSLKDYITPLDRQIALSLRLIGPPERREVPVAITNVPQQPSPDVGDGELKRCNWITKNSDKVYVQFHDECWGVPVYEDNQLFELLAMSGMLMDYNWTEILKRKELLRDAFSGFDPNTVAQMGEKEITETASNKALMLAESRVRCIVDNAKCIQKIVRQFGSFSSYIWGYVNHKPMIIRCRYPRSVPLRTPKSEAISRDLIKRGFRLVGPVIVYSFMQAAGMTNDHLIDCFRYRECLNLAHRPYMDAIPDININVLY* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1154 318 SUPERFAMILY DNA-glycosylase 112 298 IPR011257 GO:0003824|GO:0006281
Vvi1g1154 318 PANTHER OS04G0501200 PROTEIN 23 303 - -
Vvi1g1154 318 Pfam Methyladenine glycosylase 120 293 IPR005019 GO:0006284|GO:0008725
Vvi1g1154 318 Gene3D Hypothetical protein; domain 2 111 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1154 Vvi-Chr1 15664683 15666416 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1154 K01246 - vvi:100249617 608.986