Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1153 ATGTCTCCTAACTTGGACAGCCCAGTTCAAACCCAGATGGCAGTGGCAGTCTTCAAGAGCCCGCTCAGCGGGGAGTACCATCGGAGTAAGAGAATGGAAGGGAAACAACCTGCTGGTAGGAGACGGGTGTTTGTGCAAACTGAAACCGGCTGTGTCTTGGGTATGGACTTGGATCGTGGTGACAATGCCCATACTGTGAAGAGGAGGTTACAGCTTGCTTTTAATGTCCCGACTGAGGAAAGCTCATTGACATTCGGGGATATGGTGTTGAAGAATGACCTTAGTGCTGTTCGAAATGATTCCCCCCTTCTTCTAACACGGAATTTTTTGCATAGAAGCTCCTCAACCCCATGTCTCTCACCTACTGGGAAGGATATCCAACAGCGAGATCAAAGTGGCCCTATTGAAATATTGGGCCACTCTAATCAGTTTGCAAGGACTAAACAACTGGTCAAGGATATTGTTAAGGCAATTAAGATTGGGGTGGATCCAATCCCTGTTCACAGTGGGCTTGGAGGTGCCTATTATTTTAGAAACAGCAGAGGTGAGAGTGTTGCAATTGTGAAGCCAACGGATGAGGAACCTTTTGCCCCCAATAACCCAAAAGGTTTTGTTGGTAAAGCTCTTGGGCAGCCAGGTTTGAAACGTACTGTTAGGGTTGGGGAGACGGGGTTCAGAGAAGTCGCTGCTTACCTGCTTGACTATGATCATTTTGCCAATGTGCCCCCCACTGCACTGGTGAAGATCACGCATTCAATCTTCAATGTCAATGATGGAGTGAATGGAAACAAGCCTCACCAGAAGGAGCAGGTTAGCAAGATTGCATCGTTCCAGCAGTTCATTCCACATGATTTTGATGCAAGTGATCATGGGACCTCAAGCTTCCCGGTTGCTGCTGTGCATCGTATAGGGATATTGGACATTAGAATTTTAAACACTGACAGGCATGCAGGAAACCTTCTAGTTAGGAAACTTAATGACAGTGCAGGGAGGTTTGCTCAGGTGGAGCTCATTCCGATTGATCATGGTCTTTGCCTACCAGAGAGTTTGGAGGACCCATACTTTGAATGGATTCATTGGCCTCAGGCTTCTATTCCATTTTCAGAGGACGAGCTTGAGTACATAAAAAATCTTGATTCAATTCGGGATTCTGAGATGCTGCGAATGGAGCTCCCCATGATACGGGAGGCTTGTCTCCGTGTTTTGGTTCTCTGCACAATTTTCCTCAAGGAAGCTGCTGCTTTTGGTCTGTGTCTTGCTGAGATTGGTGAGATGATGAGTAGAGAGTTTCGTGGTGGAGAGGAGGAACCAAGTGAGCTTGAGTTTGTGTGCCTTGAGGCAAGGAGGCTGATAGCTGAGAGAGAGGTGTTATCCCCCAAGGCTGAAGGGGGAGAGGAGGTGTTTCAATTTGATATGGATTGCGAGGAAGACAGATTCTACTTTACTCCGAAGATGGGAGCTGATGCTTTCATGAACAGAGGACCATTGCATTTTGGAATTGGAGGTGCAAATGGTCGATTTCAACTCTCTAAGCTGGAGGAAAGCATTGAGGAGGAAGAGGAAAGTGAAAGAGAAGGAGAGCAAGAGGATTTTGCAGGCATTCCAACTCCTGCAGAGGTCTCAACCATTTCAAAGCTTTCCATGTCACTGAAGGACACCAGTCTAGGTGAGAAAAGCCAAAAATATCTGGAAGCAAAACCAGAGAGTAGTTACTTGGCAAATACATCATCTGGGCACAGGAGTGCAAATGAGCAGCTTCCCACAAGCATGAGCTTTGTGAAGCTGGCAGACATGAATGAGGAGGAATGGGTGCTGTTTTTAGAGAAGTTCCAGGAACTGCTGTACCCAGCATTTGCCAAGCGGAAATCCGTGACCCTCGGACAGAGGCAGAGACAGAGGCTTGGTACTTCATGCCAGTTTTGA 1923 0.4711 MSPNLDSPVQTQMAVAVFKSPLSGEYHRSKRMEGKQPAGRRRVFVQTETGCVLGMDLDRGDNAHTVKRRLQLAFNVPTEESSLTFGDMVLKNDLSAVRNDSPLLLTRNFLHRSSSTPCLSPTGKDIQQRDQSGPIEILGHSNQFARTKQLVKDIVKAIKIGVDPIPVHSGLGGAYYFRNSRGESVAIVKPTDEEPFAPNNPKGFVGKALGQPGLKRTVRVGETGFREVAAYLLDYDHFANVPPTALVKITHSIFNVNDGVNGNKPHQKEQVSKIASFQQFIPHDFDASDHGTSSFPVAAVHRIGILDIRILNTDRHAGNLLVRKLNDSAGRFAQVELIPIDHGLCLPESLEDPYFEWIHWPQASIPFSEDELEYIKNLDSIRDSEMLRMELPMIREACLRVLVLCTIFLKEAAAFGLCLAEIGEMMSREFRGGEEEPSELEFVCLEARRLIAEREVLSPKAEGGEEVFQFDMDCEEDRFYFTPKMGADAFMNRGPLHFGIGGANGRFQLSKLEESIEEEEESEREGEQEDFAGIPTPAEVSTISKLSMSLKDTSLGEKSQKYLEAKPESSYLANTSSGHRSANEQLPTSMSFVKLADMNEEEWVLFLEKFQELLYPAFAKRKSVTLGQRQRQRLGTSCQF* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1153 640 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 161 459 IPR000403 -
Vvi1g1153 640 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 6 636 IPR044571 -
Vvi1g1153 640 Coils Coil 509 529 - -
Vvi1g1153 640 CDD Ubl_ubiquitin_like 43 93 - -
Vvi1g1153 640 Pfam Phosphatidylinositol 3- and 4-kinase 171 422 IPR000403 -
Vvi1g1153 640 MobiDBLite consensus disorder prediction 513 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1153 Vvi-Chr1 15655820 15657742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1153 1 640 Acyl Lipid Metabolism Gene Families AT1G26270 69.585 0.0 895
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1153 - - vvi:100247983 1263.06