Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1148 ATGAAACTTGATAGTGAACCTGTATTTTGCCATTCAACTTTGGTGCACAAGTCTGATTCTAAACCTTTTGAATACAATGATTATTCTCTGGATACTGCTGTACCAAAGTCAGGCAATGAGATCGTGAAGGAAAATCAGAAAGTGATCTCATGTGATTTAAAGGGTCATGAGAGAGATGCAGATCCGTTGGATGGTGAAGATAGATTCTGGAACACATCAGAGCGTGATTGTTCTATAAATGTGGATGATATAGCAAATGCTTGTGGTAATGAAGTCAGAAATTCTGTTGCAACATGTGTTGTTTCTTCTGAAAAGTTAGAATCCTTTGAAAAGGATGGAGATATGTGCACAGATAAAAGTGTTACCAAACATGAACTGCCAGTTTGTTGTGAAGAGAGTACTTATCATGCTGTTAAGGACATCTGCATTGATGAGGGAATGCTTTCCCCAGAAAAAATTTTGGTTGAAAATGGTAAGGAGGAGCATGAGGGTTTTTGCCCCTTCCTGCCACCTGATACAGATAAAAATGTTGATCCAACCAAAGAGACAGCTGATAAAGAATTGCCCCTTCCAGATGGACAAAAAGCTTCGGCAGAAAATGATTGTGGCAAGGATTTGATGCAGGAAGAAGAAAACTATGATGCTAGAGACAAAATTATCAGTGATACATCTGAAGAGAAGATTGTGCCTGAAGATATTTTTTTGATTCCAGAGTTGAGCAAAGCAAATTCCATGCCTGAGTCCTCAGAGTTTAATGGCATGGAAATAGAACACCAGTGTATCCAGAATCCAAATGGAGAAGCAGTCTTGGAGAACCCTGCTCTGGTTTCCGAAGCCGAAGAATCAGATAAAAACAGTTTCCCCAATGAGTTATCTTACAACAGCAAGTTGGAGAGTGGAACCATCACATTTGATTTTGGGTCTTCTACTACATCAATGGATAGCGGGAGAGAGGTGAGCCCTCAAAATGATGGCTGTGAACCTCCTCTGGAGTCTCAAAACCTGTCCAAGCTTGAAGATGGTTCTGAATCTCTGCCATTTTCCGGCCAAATTCAAAGAGGGCTCGGGGAGTCAAGTTTCTCTGCAGCAGGTCCTTCATCAGCTTTGATCAGTTACTCTGGGCAGATAACACATTCTGGTAACATCTCTCTGAGATCAGACAGCAGCACCACCAGCACCCGTTCCTTTGCCTTCCCCGTATTACAGACGGAGTGGAATAGCAGTCCAGTAAGAATGGCGAAAGCAGAGCGGCGACACTTGCGGAAGCACAGAAGTTGGAGGCGGGGCATTCTTTGCTGTAGATTCTGA 1308 0.4258 MKLDSEPVFCHSTLVHKSDSKPFEYNDYSLDTAVPKSGNEIVKENQKVISCDLKGHERDADPLDGEDRFWNTSERDCSINVDDIANACGNEVRNSVATCVVSSEKLESFEKDGDMCTDKSVTKHELPVCCEESTYHAVKDICIDEGMLSPEKILVENGKEEHEGFCPFLPPDTDKNVDPTKETADKELPLPDGQKASAENDCGKDLMQEEENYDARDKIISDTSEEKIVPEDIFLIPELSKANSMPESSEFNGMEIEHQCIQNPNGEAVLENPALVSEAEESDKNSFPNELSYNSKLESGTITFDFGSSTTSMDSGREVSPQNDGCEPPLESQNLSKLEDGSESLPFSGQIQRGLGESSFSAAGPSSALISYSGQITHSGNISLRSDSSTTSTRSFAFPVLQTEWNSSPVRMAKAERRHLRKHRSWRRGILCCRF* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1148 435 PANTHER 18S PRE-RIBOSOMAL ASSEMBLY PROTEIN GAR2-LIKE PROTEIN 35 435 IPR040378 GO:0009786
Vvi1g1148 435 MobiDBLite consensus disorder prediction 304 350 - -
Vvi1g1148 435 MobiDBLite consensus disorder prediction 165 200 - -
Vvi1g1148 435 MobiDBLite consensus disorder prediction 175 189 - -
Vvi1g1148 435 MobiDBLite consensus disorder prediction 304 319 - -
Vvi1g1148 435 MobiDBLite consensus disorder prediction 326 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1148 Vvi-Chr1 15492333 15495175 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1148 - - vvi:100247891 873.233