Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1146 ATGACACTGTATGACAAAAAAATACTAGGAAAAAGAAAACCATCACCCTTCTCAGCTCCAAGAGACGCCCCTCCAGTCCCAAAGAAAGTTCCCTTCACAGTCTCAGCTCATGGCACATCGTGGCAAGATCCCTACCATTGGATGTCCAACACCGCTGACCCCGACCTCTCCGCATACCTTCGCCACGAAAACTCATATGCTGAAGCTTTCATGGCTGACACCCTTAACCTCCAGCGGACACTCTTTTCTGAGATGAATTCTAGAATGCCCACTAATATTTCCACTCCCACTGAACGCTGGGGGCCATGGTTATACTACCAATACATTCCGGAGGGGAAGGAATACCCTGTACTTTGTCGGAAATTAGCAACTCAGACAAATGGTTGGGCAAAGTCTTTTCTTAATAACGTGATAGGAGAATTTGGAAGGGAGAAAGTTCTCCTGGACTGGAATGAAATTGCAGAAGAATATGGTTATGTTCATGTTGGTACATGTCGAGTTTCTCCAGATCACAACTTTCTTGCATACACACTTGATATAACTGGGAGTGAACGGTTCATGCTTCAAATTAAGGATCTCCATAGTGGCTGTATTCTTCCAGACTTGAGGGTTGATGGGGTTGTTAGCTTGGCATGGGCTCAAGATGGTTGTACTTTATTCTATACAACAACAGATGAAAACCAACGGCCTTACAGGGTGCAATGCATTAAACTGGGATCAGATGCTGTGAATGATGTCCCAGTATTTACAGAAAGTGATCCCAGCTTCTGTGTGGACATCACGAGTACAAAGGATGGCAAGTTTATAACCGTTTTCGTGATAAATGCAACCAATCCAGAAGAGGGCTTGCGAAGAATGAATAAGCGTGTCCCTGGTGTACAGTATTTTTTGGAACATCACCATGGTTTTTTCTATATTCTCACAAATGCTCCTTTAACCGATAAGGAATTGTCTGTTGGAGATTATTATTTGGCCAGATGCCAGGTTGACGATGTACAGTTGGCTAATTGGCAGAACATCATCCTCCCAGGTGAAGATATTAGCATACAAGATATGGACATTTTTCATGGACATTTGGTGCTTTTCCTCAATAGCAAAGGTTGCTCTATGATATGCTCCATCAATATGCCAATTGATGTTAATTATAAGCAGCAAATGGAGATTGGTGATCTTAGTCCATGGTTCTTCCCTCTGCCTTCGGGTTTATGTAAAGTTGTTCCATGTTCAAATCATGACTTCATGAACTTCGTCTATCGTGTGGTTGTTTCATCTCCAGTGATGCCTGATATGATCATTGATTATGACATGCGGCAACGGGTATTCTCCATAGTGCAGCAAGAGGAGGTACTAGGTGTTTTTGGTAATAGTGGATCGTTCTCACAGACTCATGACCTAAATACTAACAAACTGTTGGATGCCCAAAATGGTGAGAACAAACATGCCCAGATTACTGAAGTTCAGAGATGGAAGGACTTTTCTGATGCATACTGTTGTGAAAGAAAGGAGGTTATTTCCCATGATGGTGTTGAGGTTCCTCTGACTATTTTGTACTCACGAGAAGCATGGAAGAAGGGTCTGTCTCCTGGCCTTCTACAAGGCTATGGAGCATATGGGGAAGTTCTAGATAAAGCCTGGTGTTCAGATCGTCTGAGTTTGCTTGATCGTGGCTGGGTGGTGGCATTCGCTGATGTGAGGGGTGGTGGAGGTCCGGATTCTTCATGGCACAAATGTGGCAGTGGATTGAACAAGCTAAACTCTATTTATGACTTTGTTTTATGCGGCAAATACCTGGTTAATGAGGGCTATGTTCATGAAGACCAGCTTGGTGCTATTGGATTTAGTGCAGGAGGTCTTCTTGTAGGGGCAGCTATCAATATGTGTCCTGATATGTTTCGTGCTGCTATTTTGAAGGTTCCATTTCTTGACATTTGCAACACATTGTTAGATCCCAATTTGCCTCTCACTTTATTGGACTACGAAGAATTTGGAAATCCTCGAGTACAATCCCAATTTGAGTCCATTTTAAGTTATTCTCCATATGATAATATTTCTCAAGGAAGCTGTCATCCTTCAGTGCTTGTTACGGCATCATTCTATGACTCAAGGGTGGGAGTTTGGGAAGCTGCCAAATGGGTAGCCAAAGTACGTGATAGCACTTGTTCAAGTTGTTCCAGTGGGGTCATCCTGAAGACGAATATGAATGGAGGCCATTTTGGTGAAGGAGGCCGTCATGGTCACTGTGAGGAAACAGCGTATGAATATGCTTTTCTAATGAAAGTTATGGGGATTTCATGCGATACCACATGA 2307 0.4304 MTLYDKKILGKRKPSPFSAPRDAPPVPKKVPFTVSAHGTSWQDPYHWMSNTADPDLSAYLRHENSYAEAFMADTLNLQRTLFSEMNSRMPTNISTPTERWGPWLYYQYIPEGKEYPVLCRKLATQTNGWAKSFLNNVIGEFGREKVLLDWNEIAEEYGYVHVGTCRVSPDHNFLAYTLDITGSERFMLQIKDLHSGCILPDLRVDGVVSLAWAQDGCTLFYTTTDENQRPYRVQCIKLGSDAVNDVPVFTESDPSFCVDITSTKDGKFITVFVINATNPEEGLRRMNKRVPGVQYFLEHHHGFFYILTNAPLTDKELSVGDYYLARCQVDDVQLANWQNIILPGEDISIQDMDIFHGHLVLFLNSKGCSMICSINMPIDVNYKQQMEIGDLSPWFFPLPSGLCKVVPCSNHDFMNFVYRVVVSSPVMPDMIIDYDMRQRVFSIVQQEEVLGVFGNSGSFSQTHDLNTNKLLDAQNGENKHAQITEVQRWKDFSDAYCCERKEVISHDGVEVPLTILYSREAWKKGLSPGLLQGYGAYGEVLDKAWCSDRLSLLDRGWVVAFADVRGGGGPDSSWHKCGSGLNKLNSIYDFVLCGKYLVNEGYVHEDQLGAIGFSAGGLLVGAAINMCPDMFRAAILKVPFLDICNTLLDPNLPLTLLDYEEFGNPRVQSQFESILSYSPYDNISQGSCHPSVLVTASFYDSRVGVWEAAKWVAKVRDSTCSSCSSGVILKTNMNGGHFGEGGRHGHCEETAYEYAFLMKVMGISCDTT* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1146 768 Pfam Prolyl oligopeptidase family 548 762 IPR001375 GO:0006508|GO:0008236
Vvi1g1146 768 MobiDBLite consensus disorder prediction 9 28 - -
Vvi1g1146 768 PANTHER PROTEASE FAMILY S9A OLIGOPEPTIDASE 13 763 - -
Vvi1g1146 768 Gene3D alpha/beta hydrolase 43 759 IPR029058 -
Vvi1g1146 768 SUPERFAMILY alpha/beta-Hydrolases 498 757 IPR029058 -
Vvi1g1146 768 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 24 439 IPR023302 GO:0004252
Vvi1g1146 768 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 612 632 IPR002470 GO:0004252|GO:0006508
Vvi1g1146 768 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 670 685 IPR002470 GO:0004252|GO:0006508
Vvi1g1146 768 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 582 601 IPR002470 GO:0004252|GO:0006508
Vvi1g1146 768 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 689 711 IPR002470 GO:0004252|GO:0006508
Vvi1g1146 768 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 554 578 IPR002470 GO:0004252|GO:0006508
Vvi1g1146 768 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 528 546 IPR002470 GO:0004252|GO:0006508
Vvi1g1146 768 SUPERFAMILY Peptidase/esterase 'gauge' domain 20 451 - -
Vvi1g1146 768 Gene3D - 92 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1146 Vvi-Chr1 15443313 15464249 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1146 - - vvi:100258143 1554.65