Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1143 ATGGGGAGATGGAGATGTTCCATTCTCCTTGGAACCCTCCTCACCAGCACGTCCAAATATCCTACTCCTTACTTCTGCCGCCCTTTCACTCCTCTTCGCTACCTCCCATTTCCTTCAAATCCCATTTCACGCTTCTTCAGATTCTTCCCGTTTTCGGCACTCCCATCTCCGGCCTCCGTGTACGCCAATGACTTTGTTTCCGGGTCTCATGATTTTCCTCACGACTACATCTTCCAACCCAGGGAGGACGATGGATCGGAAAAAATCCCTGTTAAGGCCTTCTTCCTTTGCACTAGTATTGATTTAAGGAGCATGCAAGCTGAGCATTGGAGCAATATTGTTCCTCCTTCCTCTCGTTCAGCAAATTATATTGTTCTCAGATATTACGATTTCCCTTCAGAAATCACTGGCATTGGAGGTGAAGATAATGTGGGCTGCTGTCATTATATGGTTGTATTCCAATATGGATCTGCTGTCCTATTTAACATTGTGGACAATGAAGTTGAAGCTTATCTGAAAATCGTTAGAAGATATGCTTCTGGATTGCTACCTGAGATGAGGAAAGATGATTATGCTGTAAAACAAAATCCAGTCTTGGCTGAGGATATGCAGGGAGGTACTGACTACATTGTTCTTAAAAATCTGGACATTGATGGTATCCGCATTATTGGACGTGTGCTTGGCCAAAGTATTGCTCTGGATTATTTTGTTTCACAGATTGATGGTATGGTTGAAGAATTTACAGATATAAATCGTGGAATGGAGAAAACTGGAACTTTCACAATGGATAGGAGGAAGCTCTTCCAACTTGTTGGAAAAGCCAATTCAAACCTAGCCGATGTCATTCTCAAAGTTGGACTCTTTGAGAGATCAGAAATTGCTTGGAGAGATGCAAAATATGCCCAAATATTTGAGTACTTATGGGAGGAGTATGAAGTCACACAACGTTTTGGGAACCTTGATTTCAAATTAAAATTTGTTGAGCACAACATTCATTTTCTTCAAGAAGTTCTCCAAAATAGGAGGTCAAATCTCCTGGAGTGGTGCATCATTTACTTGATATTTATTGAAAATGTAATCTCAATATATGAGATTATTCATGAACCAACAGCAGTTTCTTTGTGA 1125 0.4071 MGRWRCSILLGTLLTSTSKYPTPYFCRPFTPLRYLPFPSNPISRFFRFFPFSALPSPASVYANDFVSGSHDFPHDYIFQPREDDGSEKIPVKAFFLCTSIDLRSMQAEHWSNIVPPSSRSANYIVLRYYDFPSEITGIGGEDNVGCCHYMVVFQYGSAVLFNIVDNEVEAYLKIVRRYASGLLPEMRKDDYAVKQNPVLAEDMQGGTDYIVLKNLDIDGIRIIGRVLGQSIALDYFVSQIDGMVEEFTDINRGMEKTGTFTMDRRKLFQLVGKANSNLADVILKVGLFERSEIAWRDAKYAQIFEYLWEEYEVTQRFGNLDFKLKFVEHNIHFLQEVLQNRRSNLLEWCIIYLIFIENVISIYEIIHEPTAVSL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1143 374 PANTHER REQUIRED FOR MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG 81 367 - -
Vvi1g1143 374 Pfam RMND1/Sif2-Sif3/Mrx10, DUF155 150 320 IPR003734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1143 Vvi-Chr1 15309315 15323250 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1143 - - vvi:100265119 740.339