Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1142 ATGGAGAAAGCTCTTATGAAGGTAAGCAGCTTGAAAGCCGGGAGCTTTTGGATATCAAGCAAAGCCAAGGAGGAGTTCTCTAATATCACTCAGGACATTACGTATTTGTCAAATACTGTGGAAGAGAAGGCAAAGTGGGTTTTCAACAAGCTAAAAGGAAAGCCACTGAAAACCTTGCCTGATCTTCTCCGAGAGTACAACTTACCACCTGGCCTCTTTCCCCAGAACATAACATGCTACGAGTTTGATGAATCAAAGGCCAAGCTGACTGTGTACCTTCCCTCTGCCTGTGAAGTCAGCTTCAGCGACTCCTCTGTAATAAGGTATGCAACCAGGGTAAAAGGAATTCTTCTGAGGGGAAAGCTCACAGGAATAGAGGGCATGAAGACCAAGGTCCTGGTATGGGTAAAGGTCACAAATGTTGCAGTTGAAAGCTATAAGTCTGACAAGGTGTGGTTTACAGCGGGTGTGAAGAAGTCAAGACCTAAGGATGCTTATGAAATGCCCCGTGATGCTGTCAGAGTACAAGAATTTTGA 537 0.4488 MEKALMKVSSLKAGSFWISSKAKEEFSNITQDITYLSNTVEEKAKWVFNKLKGKPLKTLPDLLREYNLPPGLFPQNITCYEFDESKAKLTVYLPSACEVSFSDSSVIRYATRVKGILLRGKLTGIEGMKTKVLVWVKVTNVAVESYKSDKVWFTAGVKKSRPKDAYEMPRDAVRVQEF* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1142 178 PANTHER T31J12.3 PROTEIN-RELATED 44 170 IPR007493 -
Vvi1g1142 178 SUPERFAMILY At5g01610-like 12 177 IPR036758 -
Vvi1g1142 178 Gene3D - 37 178 IPR036758 -
Vvi1g1142 178 Pfam Protein of unknown function, DUF538 61 167 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1142 Vvi-Chr1 15304722 15307570 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1142 - - vvi:100258240 356.681