Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1137 ATGGCTAAGCAAATAAGCTGTGACCGTTCTCACCAGCGTTACGACATGTGCACAGTCAATGCCACAACCGTGTTGGAGCCCACCACCTCCACTTTCTTCCTTGTGGAGCCCACCCAAGCTCTTATGGAAAAAGTCCGGCCTTACCCTCGAAAATGGGAAACTTCCGTGATGGGCCGGATCAAGGAGGTGAGACTCACCTCAGGGCCACCCAGTCCCTCATGCCAAGTCCACCACAGTGCCCCAGCCCTTGTCTTCAGCGCTGGGGGTTACACTGGGAATGTGTTTCATGATTTCAATGATGGCTTCATCCCTCTCTACATCACCGTCAATTCCATATTTCCGGATGGAAACTACGTCCTCGTCATCCACAGTAGTCGGCGTTGGTGGGAGAGCAAGTATGCAGATCTACTCCACACGTTGAGTAAGCACCCCATCGTGAACCTGGAAAAAGCCAACGCCACGCATTGCTTTCCTTATGCCCATGTCGGCCTCATTTCACATGGTTTCATGACTATTGACCCCACACTAATGCCCAGCTCAATAAATCTCACCCATTTCCGCGGTTTCCTGGATGCGGCCTATGCCCAAAATCACCCCTTTCCCAGTCCCAACATCTCCAAGCAGAAAGCCCGACCACGCCTGGTGTTGGTGACTCGAAGCGGAGGCGCTGGGCGGCACATCTTGAACCAGGGTGACCTAAACAATGCAGCAGAGGAGGTGGGCTTCCACGTCATCCTCTTCCACCCCACCCCAACCACCTCTCTGCGGGAAGCTTACGCATTGATCAACTCAAGCCATGCCATGATGGGAGTGCACGGCGCCGCACTCACGCACTCGCTGTTTCTTAGGCCAGGTTCGGTGTTGATGCAGGTCGTGCCGCTTGGACTTGCGTGGGCGGCAGAGACGTGTTTCGGCAATTCTTCCAGGGAATTAGGGTTGGAGTACATGGAGTATAAGATTGGAGAGAAGGAGAGCACCTTGGCAGACAAGTATGGCAACGATGACATAATGGTGAAGGACCCAGTAAGGGCTCAGGGAAAGGGCTGGTCCACTAAGATTATGGACGTATATTTGAAGGAGCAAAATATTACACTGGACTTGGTTAGGTTTAGGAGACATTTGGAGGAAGCCTATAACAAAGCCAGTAAGTTCTTGCAAAACAAGGGATAA 1170 0.5231 MAKQISCDRSHQRYDMCTVNATTVLEPTTSTFFLVEPTQALMEKVRPYPRKWETSVMGRIKEVRLTSGPPSPSCQVHHSAPALVFSAGGYTGNVFHDFNDGFIPLYITVNSIFPDGNYVLVIHSSRRWWESKYADLLHTLSKHPIVNLEKANATHCFPYAHVGLISHGFMTIDPTLMPSSINLTHFRGFLDAAYAQNHPFPSPNISKQKARPRLVLVTRSGGAGRHILNQGDLNNAAEEVGFHVILFHPTPTTSLREAYALINSSHAMMGVHGAALTHSLFLRPGSVLMQVVPLGLAWAAETCFGNSSRELGLEYMEYKIGEKESTLADKYGNDDIMVKDPVRAQGKGWSTKIMDVYLKEQNITLDLVRFRRHLEEAYNKASKFLQNKG* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1137 389 PANTHER GLYCOSYLTRANSFERASE 7 381 IPR007657 GO:0016757
Vvi1g1137 389 Pfam Glycosyltransferase 61 184 288 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1137 Vvi-Chr1 15215062 15216231 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1137 - - vvi:100241096 800.045