Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1124 ATGAAGTACGTTTTAGTGACGGGTGGAGTGGTAAGCGGTCTCGGGAAAGGAGTGACTGCCAGTAGTATTGGATTGATTCTTAAGGCCTGCGGACTTCGAGTTACTTCCATCAAGATAGATCCTTATTTGAACACAGATGCTGGAACGATGTCCCCTTTTGAGCATGGGGAAGTGTATGTCTTAGATGATGGTGGAGAGGTGGACCTGGACCTTGGAAACTATGAGCGATTTCTAGATATCAAGTTGACCCGTGATAATAATATCACCACTGGGAAGATTTACCAGTCTGTTATTGACAAAGAGAGAAGAGGAGATTATCTGGGAAAAACTGTCCAGGTTGTTCCTCACATCACGGATGCCATTCAAGAGTGGGTTGAGCGTGTAGCAAAGATACCAGTGGATGGGGAAGAAGGTCCAGCTGATGTTTGTGTCATAGAATTGGGTGGAACTATAGGAGACATTGAATCAATGCCATTTATTGAGGCTCTTGGGCAATTCTCTTACCGTGTAGGTGCTGGAAACTTCTGCTTGATTCATGTCAGCCTTGTGCCCGTTCTAAGTGTAGTTGGTGAACAGAAAACAAAGCCTACACAGCATAGTGTTCGGGGACTGAGAGGCCTTGGTTTGGCACCAAATATCTTAGCCTGTCGCAGCACAACGGCACTTGATGAAAATGTGAAGGCGAAGCTCTCCCAATTTTGCCATGTCTCGGCAGAAAACATCATCACTCTATATGATGTTTCCAACATCTGGCACATCCCTTTGCTTTTACGAGATCAGAAGGCACATGAAGCAATCTTGAAAGTGTTGAACCTTCTAAGTGTTGCTGGGGAGCCATGTTTAGAGGAATGGACTTCTAGGGCTGAACTCTATGACATGTTACATGAGCGAGTGAGAATTGCCATGGTTGGAAAGTATACAGGCCTTTCTGATTCTTACCTCTCTGTAATAAAGGCTCTTCTGCACGCTTCTGTTGCCCAAGGCAAGAAACTCATTGTGGATTGGGTTCCAGCCTGTGACCTTGAACCTGAAACAGCAAAAGAGAATCCTGATGTTTACAATGCTGCATGGAATTTGTTGAAGGCTGCAGATGGGGTCCTGGTTCCAGGAGGTTTTGGTGACAGAGGTGTTCAAGGGAAAATTCTTGCCACCAAGTATGCCCGAGAAAACAGAATTCCATTCCTTGGTATTTGTCTAGGAATGCAAATTGCTGTTATTGAGTTTGCTCGATCTGTTCTTGGTCTGAAAGATGCAAACAGCACTGAGTTTGACCCCAACACCAAGAATCCCTGTGTTATATTCATGCCTGAGGGCTCAACAACCCACATGGGAGGAACCATGCGTTTGGGATCAAGGAGGACATATTTCCAGGTTATGGACTGCAAATCTGCAAAGCTATATGGCAATAGGAGCTTCATTGATGAGCGACATCGACATAGATACGAGGTGAATCCTAACATGGTGATGCATCTTGAAAATTCCGGTCTTTCATTCACTGGAAAAGATGCAAGTGGTCAACGTATGGAGATTGTTGAGTTGCCTAATCATCCATACTTTGTTGGTGTCCAATTCCATCCTGAATTTAAATCAAGACCTGGAAAACCTTCTGCTCTATTTTTAGGGCTCATAGCAGCAGCATGTGGGCAGTTGGATAGTGTTTTAAAGGAGGATCGATTCAGCCAAAAAATAGGGACAGGGAAAGGAGGAATGAGCAATGGTACTAAAATGGTGAAAACATACCAAAATGGATCTCCGACTAAGCCTGCTAATGGATCATTTGATGATGTTTACCGCAATTGTAATGGTGTTCAGGTTTAA 1818 0.4417 MKYVLVTGGVVSGLGKGVTASSIGLILKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVYVLDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVIDKERRGDYLGKTVQVVPHITDAIQEWVERVAKIPVDGEEGPADVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLIHVSLVPVLSVVGEQKTKPTQHSVRGLRGLGLAPNILACRSTTALDENVKAKLSQFCHVSAENIITLYDVSNIWHIPLLLRDQKAHEAILKVLNLLSVAGEPCLEEWTSRAELYDMLHERVRIAMVGKYTGLSDSYLSVIKALLHASVAQGKKLIVDWVPACDLEPETAKENPDVYNAAWNLLKAADGVLVPGGFGDRGVQGKILATKYARENRIPFLGICLGMQIAVIEFARSVLGLKDANSTEFDPNTKNPCVIFMPEGSTTHMGGTMRLGSRRTYFQVMDCKSAKLYGNRSFIDERHRHRYEVNPNMVMHLENSGLSFTGKDASGQRMEIVELPNHPYFVGVQFHPEFKSRPGKPSALFLGLIAAACGQLDSVLKEDRFSQKIGTGKGGMSNGTKMVKTYQNGSPTKPANGSFDDVYRNCNGVQV* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1124 605 Gene3D - 1 291 IPR027417 -
Vvi1g1124 605 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 299 552 - -
Vvi1g1124 605 PANTHER CTP SYNTHASE 1 555 IPR004468 GO:0003883|GO:0006221
Vvi1g1124 605 NCBIfam CTP synthase (glutamine hydrolyzing) 1 545 IPR004468 GO:0003883|GO:0006221
Vvi1g1124 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 272 IPR027417 -
Vvi1g1124 605 FunFam CTP synthase 295 560 - -
Vvi1g1124 605 FunFam CTP synthase 1 292 - -
Vvi1g1124 605 Hamap CTP synthase [pyrG]. 1 550 IPR004468 GO:0003883|GO:0006221
Vvi1g1124 605 CDD GATase1_CTP_Synthase 298 543 IPR033828 GO:0003883|GO:0006241
Vvi1g1124 605 Pfam Glutamine amidotransferase class-I 309 544 IPR017926 -
Vvi1g1124 605 CDD CTPS_N 2 268 IPR017456 GO:0003883|GO:0006221
Vvi1g1124 605 SUPERFAMILY Class I glutamine amidotransferase-like 296 549 IPR029062 -
Vvi1g1124 605 Pfam CTP synthase N-terminus 2 272 IPR017456 GO:0003883|GO:0006221
Vvi1g1124 605 Gene3D - 295 560 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1124 Vvi-Chr1 14670362 14677819 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1124 K01937 - vvi:100249622 1203.35