Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1118 ATGGCAAACGAGAAAGAGAGAGTAGAGAAGAAAACGTTTGTGGGGTTTGTACGGAACTGTATGGCGGAGCTTAAAATTTTGTTAACTGCTCTTCTATTGCTCTGTACCATAGCAACCCTTGTTCAATTTCTCCCTCCTCGTTTTTCATTCTCCCCATCCGATCTCCGTAACTGTCTCTCCGCAATCTCATCCTCTTCTTCTTCTTCTAATTCTTCTCAGAAGGTGACCTCCCCACCACTTCCACACCCATCCCCACCCGCCTCTGATCCTCCTTCTCCCCCACCATTACCCCCACCTCCTTCCATTCAACAGCAACAAAAAGATCAGATTCTAGACGGTGGCATCATCAAGCGGGCCTTCAATCCTTACGGTGCAGCCGCATACAACTTCGTTCTCATGTCCGCTTACAGAGGTGGCCTCAACACTTTCGCGGTCGTCGGACTCGCTTCCAAGCCCCTTCACCTTTTCGGTAATCCTACCTATCAATGCGAGTGGGTTCCCCAATCCAATCAAACCCAACAACAGCAACAAATGCCACCATCTATCTCCACCCGCGGCTACAAGATCCTCCCTGACTGGGGCTACGGCCGCGTTTACACCGTTGTTGTTGTCAACTGTACATTTCCTGTTGCAGTAGGCCAAAATGGTTCCGGCGGCCAATTGCTCCTCCATGCCTCCACTTCCGGTGGCGGTGATCGGGATCTCAATGTGACGGACACGATTGAAGCTCTAATAGAAGCCCCCGGGAGCTTAAATGCGTCGTTTTATACATCCCCGGCCGAACCCAAATACGATTATCTCTACTGCGGGTCGTCCTTATACGGGAATTTGAGTCCCCAGAGGGTGAGGGAATGGATTGCTTACCACGTTAAGTTCTTCGGAGAGAGGTCCCATTTTGTGATACACGACGCAGGTGGTGTACATTCCGGGGTTCTAGAGGTGTTGAAGCCGTGGATGGAAAAAGGGTACGTGACACTGCAGGATATAAGAGAGCAGGAACGTTTTGATGGCTATTATCACAATCAGTTCCTTGTTGTGAATGATTGTTTGCATAGATATCGCTTTATGGCTAAGTGGATGTTCTTCTTTGATGTTGATGAGTATATCTATGTGCCACCTAAGAACACTATAAAGTCCGTACTCAATTCCCTTTCCGGATATACCCAATTCACCATTGAACAGATGCCCATATCCAACAAGCTCTGCCTCTCTTCAGACGCCGGTAAAGCTCCCAGAAAATGGGGGTTTGAAAAGCTGGTGTATAGGGATGTTAAGAGAGGAATCAGGAGGGACCGGAAATATGCAGTGCAACCACGCAATGTGTTTGCAACAGGAGTGCACTTGTCACAAAACCTAGCAGGTAAGACAACACACAAAACGGACCACCTGGTCAAGTATTTCCATTATCATGGAACCGTAGCAGAACGGCGCGAGCCATGTCGCAAGATGGTAAATACGACAGAGCTCACATTTGATGGTACACCTTATGTAATGGACACCACAATGCGGGCTGTTGCTGGGTCTGTGAAGATATTTGAGCTCAAAGCCATTGGGTCTCGGTTACAAAGGACTCCTCAATGA 1581 0.4845 MANEKERVEKKTFVGFVRNCMAELKILLTALLLLCTIATLVQFLPPRFSFSPSDLRNCLSAISSSSSSSNSSQKVTSPPLPHPSPPASDPPSPPPLPPPPSIQQQQKDQILDGGIIKRAFNPYGAAAYNFVLMSAYRGGLNTFAVVGLASKPLHLFGNPTYQCEWVPQSNQTQQQQQMPPSISTRGYKILPDWGYGRVYTVVVVNCTFPVAVGQNGSGGQLLLHASTSGGGDRDLNVTDTIEALIEAPGSLNASFYTSPAEPKYDYLYCGSSLYGNLSPQRVREWIAYHVKFFGERSHFVIHDAGGVHSGVLEVLKPWMEKGYVTLQDIREQERFDGYYHNQFLVVNDCLHRYRFMAKWMFFFDVDEYIYVPPKNTIKSVLNSLSGYTQFTIEQMPISNKLCLSSDAGKAPRKWGFEKLVYRDVKRGIRRDRKYAVQPRNVFATGVHLSQNLAGKTTHKTDHLVKYFHYHGTVAERREPCRKMVNTTELTFDGTPYVMDTTMRAVAGSVKIFELKAIGSRLQRTPQ* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1118 526 PANTHER UNCHARACTERIZED 31 490 - -
Vvi1g1118 526 MobiDBLite consensus disorder prediction 65 107 - -
Vvi1g1118 526 MobiDBLite consensus disorder prediction 78 102 - -
Vvi1g1118 526 Pfam Glycosyltransferase family 92 265 480 IPR008166 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1118 Vvi-Chr1 14402708 14405348 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1118 K23869 - vvi:100251363 973.385