Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi1g1108 ATGGAGGTTAGATCTGAGGGTAGTTTACAGGTGAGGTGCGATAAGCTTCCAGCTCCGGTGATTCCAAGGACTCGTCTTCAGGTGTGGTTTATTCGTGTGTGCTCCAGCATTTTGCTATGGACGTGTCTGGTGCAGTTGGTTGCAGTGGGGGAGCTATGGCATCCGCGTTTGCTAACTGGAATATCATCCCACTTATCTCGGATAACTCCGTATCCTTTGCACGTCGAAAAGGCTATTTTATCGCCTCCTCCTCGTCCTCTCCCTGCAAGGAGCTACCAAAGCAATGGTTTTCTTAGAGTTTCTTGCAATGGGGGCTTGAACCAAATGCGGGCTGCGATCTGTGACATGGTCACTGTTGCTCGGTTTTTGAATCTCACTCTAGTAGTCCCAGAACTTGATAAGACATCTTTCTGGTCGGACCCTAGTAATTTTGAGGATATCTTTGATGTGAGACACTTCATTGAATCACTAAGAGATGAAGTTCGCATTGTCAAAAGGCTGCCTAAGAGGTTCAGCAGGAAGTACGGATACAAGCAACTTGCCATGCCCCCTGTCAGCTGGTCAAATGAAAAATATTACTCTGAACAGATTCTGCCACTTTTCAGTAAATACAAGGTGATACAATTCAACAAAACAGATGCACGCTTGGCAAACAATGGGCTCCCACTTGATCTTCAGAAACTCAGGTGTCGTGTTAATTTCCAGGCACTGAAATTCACTCCTCAAATTGAGGCTTTGGGGCACAAATTGGTTCATATTCTTCAGGAAAAGGGACCTTTTGTAGCTTTGCATTTAAGATACGAGATGGACATGCTGGCTTTCTCAGGTTGTACTCATGGCTGCACTGAGGAAGAAGCTGAGGAACTCAAGCAGATGAGGTATGCATATCCTTGGTGGAGAGAGAAAGAGATAGTGTCTGAAGAGAGGAGATTACAAGGTTTGTGCCCTCTCACACCAGAGGAGGTGGCTTTAGTTATGCAAGCACTGGGTTTTGATAAGGGCATACAGATCTATATTGCATCTGGTGAGATTTATGGCAGTGAACAGAGACTGGCAGCACTAAGAGCAGCATTTCCAAAGATTGTGAGTCTTCTTATTACCCTGTGCCTTGCCTTAATCCTTTTATTTTTGTGA 1134 0.4506 MEVRSEGSLQVRCDKLPAPVIPRTRLQVWFIRVCSSILLWTCLVQLVAVGELWHPRLLTGISSHLSRITPYPLHVEKAILSPPPRPLPARSYQSNGFLRVSCNGGLNQMRAAICDMVTVARFLNLTLVVPELDKTSFWSDPSNFEDIFDVRHFIESLRDEVRIVKRLPKRFSRKYGYKQLAMPPVSWSNEKYYSEQILPLFSKYKVIQFNKTDARLANNGLPLDLQKLRCRVNFQALKFTPQIEALGHKLVHILQEKGPFVALHLRYEMDMLAFSGCTHGCTEEEAEELKQMRYAYPWWREKEIVSEERRLQGLCPLTPEEVALVMQALGFDKGIQIYIASGEIYGSEQRLAALRAAFPKIVSLLITLCLALILLFL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi1g1108 377 CDD O-FucT_plant 97 363 IPR024709 -
Vvi1g1108 377 PIRSF UCP009360 4 365 IPR024709 -
Vvi1g1108 377 PANTHER OS02G0726500 PROTEIN-RELATED 26 363 - -
Vvi1g1108 377 Pfam GDP-fucose protein O-fucosyltransferase 97 362 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi1g1108 Vvi-Chr1 13989100 14006118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi1g1108 93 363 Miscellaneous Gene Families AT3G54100 53.676 1.25e-99 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi1g1108 K23280 - vvi:100247184 723.776